RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 GNSP15586 552 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 OR1E1P30953 314 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 ACSL1P33121 698 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 ADRA1BP35368 520 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 MAPK8P45983 427 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 GFPT1Q06210 699 aaPredicted RBP20.98■□□□□ 0.95
SS18-224ENST00000584083 DCAF12L1Q5VU92 463 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 WDR59Q6PJI9 974 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 MMAAQ8IVH4 418 aaKnown RBP20.98■□□□□ 0.95
SS18-224ENST00000584083 STK40Q8N2I9 435 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 FAM172AQ8WUF8 416 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 MIR1-1HGQ9H1L0 117 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 PABPC3Q9H361 631 aaKnown RBP20.98■□□□□ 0.95
SS18-224ENST00000584083 SUSD2Q9UGT4 822 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 SCML1Q9UN30 329 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 OR51B4Q9Y5P0 310 aa20.98■□□□□ 0.95
SS18-224ENST00000584083 CACNA1AO00555 2505 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 IGLV3-10A0A075B6K4 115 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 METTL12A8MUP2 240 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 SERPINF2P08697 491 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 ENGP17813 658 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 ATXN3P54252 364 aaPredicted RBP20.97■□□□□ 0.95
SS18-224ENST00000584083 UBASH3AP57075 661 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 KRT83P78385 493 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 SFSWAPQ12872 951 aaKnown RBP20.97■□□□□ 0.95
SS18-224ENST00000584083 CST6Q15828 149 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 C6orf118Q5T5N4 469 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 DAB2IPQ5VWQ8 1189 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 PPP1R2P3Q6NXS1 205 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 SETD3Q86TU7 594 aaPredicted RBP20.97■□□□□ 0.95
SS18-224ENST00000584083 MCOLN2Q8IZK6 566 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 PTPRN2Q92932 1015 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 EDEM3Q9BZQ6 932 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 ZYG11BQ9C0D3 744 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 BTBD1Q9H0C5 482 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 FSCN3Q9NQT6 498 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 FBXL12Q9NXK8 326 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 TAS2R14Q9NYV8 317 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 AIPL1Q9NZN9 384 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 OR12D3Q9UGF7 316 aa20.97■□□□□ 0.95
SS18-224ENST00000584083 MED19A0JLT2 244 aaPredicted RBP20.96■□□□□ 0.95
SS18-224ENST00000584083 CDX4O14627 284 aaPredicted RBP20.96■□□□□ 0.95
SS18-224ENST00000584083 MID1O15344 667 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 SEMA4FO95754 770 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 VAV1P15498 845 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 RRM1P23921 792 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 SLC8A1P32418 973 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 PSMD8P48556 350 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 HDAC4P56524 1084 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 UAP1L1Q3KQV9 507 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 PPM1JQ5JR12 505 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 DCUN1D2Q6PH85 259 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 DNASE2BQ8WZ79 361 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 SNX19Q92543 992 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 CENPIQ92674 756 aaPredicted RBP20.96■□□□□ 0.95
SS18-224ENST00000584083 MCEEQ96PE7 176 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 FAM129BQ96TA1 746 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 OMDQ99983 421 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 SYT11Q9BT88 431 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 C2orf49Q9BVC5 232 aaPredicted RBP20.96■□□□□ 0.95
SS18-224ENST00000584083 GTPBP2Q9BX10 602 aaKnown RBP20.96■□□□□ 0.95
SS18-224ENST00000584083 PCED1AQ9H1Q7 454 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 HAUS4Q9H6D7 363 aa20.96■□□□□ 0.95
SS18-224ENST00000584083 SPTBN2O15020 2390 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 TM4SF5O14894 197 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 VASPP50552 380 aaPredicted RBP20.95■□□□□ 0.94
SS18-224ENST00000584083 KLHL30Q0D2K2 578 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 ELAVL3Q14576 367 aaKnown RBP20.95■□□□□ 0.94
SS18-224ENST00000584083 DLG2Q15700 870 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 RWDD4Q6NW29 188 aaKnown RBP20.95■□□□□ 0.94
SS18-224ENST00000584083 SCYL2Q6P3W7 929 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 USP30Q70CQ3 517 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 DRC7Q8IY82 874 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 FRS2Q8WU20 508 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 VCPIP1Q96JH7 1222 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 PSMB7Q99436 277 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 SPON2Q9BUD6 331 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 TTYH3Q9C0H2 523 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 OSBPL2Q9H1P3 480 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 C6orf106Q9H6K1 298 aaPredicted RBP20.95■□□□□ 0.94
SS18-224ENST00000584083 SGK2Q9HBY8 427 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 CAPN10Q9HC96 672 aa20.95■□□□□ 0.94
SS18-224ENST00000584083 PPARGC1AQ9UBK2 798 aaKnown RBP20.95■□□□□ 0.94
SS18-224ENST00000584083 EIF2B4Q9UI10 523 aaKnown RBP20.95■□□□□ 0.94
SS18-224ENST00000584083 CNOT1A5YKK6 2376 aaKnown RBP20.95■□□□□ 0.94
SS18-224ENST00000584083 A0A0D9SEW6 157 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 A0A1W2PP55 124 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 TCRBV5S1A1TA0A578 114 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 FAM47DPA6NHR8 397 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 CCP110O43303 1012 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 ATP9BO43861 1147 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 BNIP3LO60238 219 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 SNAP91O60641 907 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 RNASEH2AO75792 299 aaKnown RBP20.94■□□□□ 0.94
SS18-224ENST00000584083 IL1BP01584 269 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 SYPP08247 313 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 DESP17661 470 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 PRKCIP41743 596 aa20.94■□□□□ 0.94
SS18-224ENST00000584083 ZNF143P52747 638 aaPredicted RBP20.94■□□□□ 0.94
SS18-224ENST00000584083 RPL7AP62424 266 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms