RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1-219ENST00000583294 KAT2AQ92830 837 aa6.11□□□□□ -1.43
SMARCE1-219ENST00000583294 SEC62Q99442 399 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-219ENST00000583294 TAOK3Q9H2K8 898 aa6.11□□□□□ -1.43
SMARCE1-219ENST00000583294 PTGFRNQ9P2B2 879 aa6.11□□□□□ -1.43
SMARCE1-219ENST00000583294 CD207Q9UJ71 328 aa6.11□□□□□ -1.43
SMARCE1-219ENST00000583294 SH2D7A6NKC9 451 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 MSI1O43347 362 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 IFIT1P09914 478 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 ATP5F1P24539 256 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 CIITAP33076 1130 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 SLC12A2P55011 1212 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 VAMP2P63027 116 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 SRSF4Q08170 494 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 IL13RA2Q14627 380 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 NAA25Q14CX7 972 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 KIAA1755Q5JYT7 1200 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 INTS11Q5TA45 600 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 SLC18B1Q6NT16 456 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 RETSATQ6NUM9 610 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 NAXEQ8NCW5 288 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 RRP36Q96EU6 259 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 PHF7Q9BWX1 381 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 Q9N2J8 555 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 UBN1Q9NPG3 1134 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 ALKBH4Q9NXW9 302 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 FLRT1Q9NZU1 646 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 UPB1Q9UBR1 384 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 ARHGAP26Q9UNA1 814 aa6.1□□□□□ -1.43
SMARCE1-219ENST00000583294 DPPA5A6NC42 116 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 KCNU1A8MYU2 1149 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 KCNJ18B7U540 433 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 FCGR2AP12318 317 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 HNF1BP35680 557 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 RHAGQ02094 409 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 CFHR1Q03591 330 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 TBX2Q13207 712 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 SEMA3AQ14563 771 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 UBAP2Q5T6F2 1119 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 SLC9C2Q5TAH2 1124 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 SLC2A7Q6PXP3 512 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 SLC22A25Q6T423 547 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 CYB5R4Q7L1T6 521 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 PPM1MQ96MI6 270 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 PIMREGQ9BSJ6 248 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 SLC26A6Q9BXS9 759 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 CADM1Q9BY67 442 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 FRMD8Q9BZ67 464 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 AAMDCQ9H7C9 122 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 UTS2RQ9UKP6 389 aa6.09□□□□□ -1.43
SMARCE1-219ENST00000583294 C17orf100A8MU93 164 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 BCAR3O75815 825 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 CBX6O95503 412 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 ATP1A3P13637 1013 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 CD53P19397 219 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 KLRC2P26717 231 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 STAT1P42224 750 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 CYP2J2P51589 502 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 GALNT2Q10471 571 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 TBL3Q12788 808 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 DAZAP2Q15038 168 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 FAM171A1Q5VUB5 890 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 NAPEPLDQ6IQ20 393 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 LRIG3Q6UXM1 1119 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 FAM57BQ71RH2 274 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 LRRC8DQ7L1W4 858 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 ST8SIA4Q92187 359 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 NCSTNQ92542 709 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 CD180Q99467 661 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 ZNF304Q9HCX3 659 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 TMEM184CQ9NVA4 438 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 TMEM45AQ9NWC5 275 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 HDAC6Q9UBN7 1215 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 CNOT7Q9UIV1 285 aaKnown RBP6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 ANAPC4Q9UJX5 808 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 TBX20Q9UMR3 447 aa6.08□□□□□ -1.44
SMARCE1-219ENST00000583294 FAM90A7PA6NKC0 464 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 FAM90A22PA8MWA6 464 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 FAM90A12PA8MX19 464 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 FAM90A23PA8MXZ1 464 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 J3KRW8 73 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 RHODO00212 210 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 ADAM10O14672 748 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 EPB41L2O43491 1005 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 STRNO43815 780 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 WNT1P04628 370 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 CYP19A1P11511 503 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 HOXD9P28356 352 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 CHRNA5P30532 468 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 PSMC2P35998 433 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 GGT5P36269 586 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 PTPN9P43378 593 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 MTNR1AP48039 350 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 NR1H2P55055 460 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 ZNF793Q6ZN11 406 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 ADGRG6Q86SQ4 1221 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 CCDC25Q86WR0 208 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 TCP11L2Q8N4U5 519 aa6.07□□□□□ -1.44
SMARCE1-219ENST00000583294 SCAIQ8N9R8 606 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms