RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 UCMAQ8WVF2 138 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 NAT9Q9BTE0 207 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 RRN3Q9NYV6 651 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 ARMCX1Q9P291 453 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 MTO1Q9Y2Z2 717 aaKnown RBP13.97□□□□□ -0.17
SRSF1-205ENST00000582730 GOLGA8TH3BQL2 631 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 NCAM2O15394 837 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 ADAMTS4O75173 837 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 AP2A1O95782 977 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 ALDOAP04075 364 aaKnown RBP13.97□□□□□ -0.17
SRSF1-205ENST00000582730 KCNA4P22459 653 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 CNTFP26441 200 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 CBLBQ13191 982 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 CCNJLQ8IV13 435 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 APBB2Q92870 758 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 AZIN2Q96A70 460 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 FCRL3Q96P31 734 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-205ENST00000582730 LRRC40Q9H9A6 602 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 ABI2Q9NYB9 513 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-205ENST00000582730 TRPM7Q96QT4 1865 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 CA12O43570 354 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 ALDH1A2O94788 518 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 DLDP09622 509 aaKnown RBP13.97□□□□□ -0.17
SRSF1-205ENST00000582730 RPS6KA3P51812 740 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 SDHAF4Q5VUM1 108 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 ITPRIPL1Q6GPH6 555 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 CMC1Q7Z7K0 106 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 ALYREFQ86V81 257 aaKnown RBP13.97□□□□□ -0.17
SRSF1-205ENST00000582730 CRLF3Q8IUI8 442 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 FAM136AQ96C01 138 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 MFSD3Q96ES6 412 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 KCNK13Q9HB14 408 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 CSNK1G1Q9HCP0 422 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 NMRK1Q9NWW6 199 aa13.97□□□□□ -0.17
SRSF1-205ENST00000582730 PRG3Q9Y2Y8 225 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-205ENST00000582730 SHROOM3Q8TF72 1996 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 ZNF623O75123 536 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 BPGMP07738 259 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 CD68P34810 354 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-205ENST00000582730 SLC5A3P53794 718 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 YWHAHQ04917 246 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-205ENST00000582730 STX3Q13277 289 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 PDE1CQ14123 709 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-205ENST00000582730 KHDC1Q4VXA5 237 aaKnown RBP13.96□□□□□ -0.17
SRSF1-205ENST00000582730 FASTKD1Q53R41 847 aaKnown RBP13.96□□□□□ -0.17
SRSF1-205ENST00000582730 HSP90AA5PQ58FG0 334 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 ARHGAP36Q6ZRI8 547 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.96□□□□□ -0.17
SRSF1-205ENST00000582730 HDAC11Q96DB2 347 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 PGAP3Q96FM1 320 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-205ENST00000582730 ZNF333Q96JL9 665 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 RILPQ96NA2 401 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 GBA3Q9H227 469 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 DCLRE1BQ9H816 532 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 ARL8BQ9NVJ2 186 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 PPARGC1AQ9UBK2 798 aaKnown RBP13.96□□□□□ -0.17
SRSF1-205ENST00000582730 DSEQ9UL01 958 aa13.96□□□□□ -0.17
SRSF1-205ENST00000582730 NVLO15381 856 aaKnown RBP13.96□□□□□ -0.18
SRSF1-205ENST00000582730 CAPN15O75808 1086 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 SAT1P21673 171 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 TEX44Q53QW1 395 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 SPANXN3Q5MJ09 141 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 CES4AQ5XG92 561 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 FAM171BQ6P995 826 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 RFWD3Q6PCD5 774 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 OTOP3Q7RTS5 596 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 STRA8Q7Z7C7 330 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 APLFQ8IW19 511 aaPredicted RBP13.96□□□□□ -0.18
SRSF1-205ENST00000582730 AGAP2Q99490 1192 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 GORASP1Q9BQQ3 440 aa13.96□□□□□ -0.18
SRSF1-205ENST00000582730 MLPHQ9BV36 600 aaPredicted RBP13.96□□□□□ -0.18
SRSF1-205ENST00000582730 UPF3AQ9H1J1 476 aaKnown RBP13.96□□□□□ -0.18
SRSF1-205ENST00000582730 GLRA3O75311 464 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 RTN3O95197 1032 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-205ENST00000582730 GP5P40197 560 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 GALNT2Q10471 571 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 ITGA7Q13683 1181 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 SLC39A12Q504Y0 691 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 KDELC2Q7Z4H8 507 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 PHC3Q8NDX5 983 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 C20orf96Q9NUD7 363 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-205ENST00000582730 FCHO1O14526 889 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 TRAFD1O14545 582 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-205ENST00000582730 MTSS1O43312 755 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 LYPLA1O75608 230 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-205ENST00000582730 TGDSO95455 350 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 OR1G1P47890 313 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 CPA2P48052 419 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 HCAR3P49019 387 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 PGFP49763 221 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 AQP5P55064 265 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 RCN2Q14257 317 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 PRPSAP1Q14558 356 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 OR52E8Q6IFG1 317 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 ATPAF2Q8N5M1 289 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 IRGQQ8WZA9 623 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 LBHD1Q9BQE6 289 aaPredicted RBP13.95□□□□□ -0.18
SRSF1-205ENST00000582730 C20orf27Q9GZN8 174 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 NMUR2Q9GZQ4 415 aa13.95□□□□□ -0.18
SRSF1-205ENST00000582730 CHRAC1Q9NRG0 131 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms