RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 GMIPQ9P107 970 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 MTMR11A4FU01 709 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 CCT8L1PA6NM43 557 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 WASH4PA8MWX3 477 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 CXorf49A8MYA2 514 aaPredicted RBP23.16■■□□□ 1.3
CCDC47-204ENST00000582252 E9PAM4 449 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 DFFAO00273 331 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 GJB5O95377 273 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 ZBTB17Q13105 803 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 DNAJC3Q13217 504 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 SDHAF4Q5VUM1 108 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 ATAD1Q8NBU5 361 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 SLC39A13Q96H72 371 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 VPS11Q9H270 941 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 MKS1Q9NXB0 559 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 ARL2BPQ9Y2Y0 163 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 AAR2Q9Y312 384 aaKnown RBP23.16■■□□□ 1.3
CCDC47-204ENST00000582252 STARD13Q9Y3M8 1113 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 HS3ST4Q9Y661 456 aa23.16■■□□□ 1.3
CCDC47-204ENST00000582252 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.15■■□□□ 1.3
CCDC47-204ENST00000582252 GOLGA8RI6L899 631 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 COPEO14579 308 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 MOCS2O96007 188 aaPredicted RBP23.15■■□□□ 1.3
CCDC47-204ENST00000582252 PYGBP11216 843 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 LAG3P18627 525 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 NFKB1P19838 968 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 PBX3P40426 434 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 NPY2RP49146 381 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 TUBP50607 506 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 MLLT6P55198 1093 aaPredicted RBP23.15■■□□□ 1.3
CCDC47-204ENST00000582252 CRYMQ14894 314 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 MGAT5BQ3V5L5 792 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 NAPEPLDQ6IQ20 393 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 LINC00523Q86TU6 105 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 RTL3Q8N8U3 475 aaKnown RBP23.15■■□□□ 1.3
CCDC47-204ENST00000582252 DNAAF3Q8N9W5 541 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 PPM1EQ8WY54 764 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 SERAC1Q96JX3 654 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 TTPALQ9BTX7 342 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 CASS4Q9NQ75 786 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 SMYD2Q9NRG4 433 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 SYBUQ9NX95 663 aa23.15■■□□□ 1.3
CCDC47-204ENST00000582252 CXXC1Q9P0U4 656 aaPredicted RBP23.15■■□□□ 1.3
CCDC47-204ENST00000582252 MAGEB16A2A368 324 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 NT5C1B-RDH14C9J2C7 533 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 ANKRD65E5RJM6 399 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 JCHAINP01591 159 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 CSH1P0DML2 217 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 CSH2P0DML3 217 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 PGFP49763 221 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 NEK3P51956 506 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 HTRA4P83105 476 aaPredicted RBP23.14■■□□□ 1.3
CCDC47-204ENST00000582252 LACTB2Q53H82 288 aaPredicted RBP23.14■■□□□ 1.3
CCDC47-204ENST00000582252 KCTD11Q693B1 232 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 TRMT10BQ6PF06 316 aaKnown RBP23.14■■□□□ 1.3
CCDC47-204ENST00000582252 ARNTL2Q8WYA1 636 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 CEP295NLQ96MC4 621 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 ZNF558Q96NG5 402 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 KLF6Q99612 283 aaPredicted RBP23.14■■□□□ 1.3
CCDC47-204ENST00000582252 OSER1Q9NX31 292 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 VANGL2Q9ULK5 521 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 SLC4A7Q9Y6M7 1214 aa23.14■■□□□ 1.3
CCDC47-204ENST00000582252 TBC1D4O60343 1298 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 HAPLN1P10915 354 aaPredicted RBP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 CD68P34810 354 aaPredicted RBP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 CCNFP41002 786 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 MGAT5Q09328 741 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 FRG1Q14331 258 aaKnown RBP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 TRIP4Q15650 581 aaPredicted RBP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 ANO4Q32M45 955 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 TMEM173Q86WV6 379 aaPredicted RBP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 ARHGAP12Q8IWW6 846 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 OR52K1Q8NGK4 314 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 PHOSPHO2Q8TCD6 241 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 CCT6BQ92526 530 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 OXNAD1Q96HP4 312 aaPredicted RBP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 SEPT5Q99719 369 aaPredicted RBP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 KLHL14Q9P2G3 628 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 NUDT5Q9UKK9 219 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 MRPL42Q9Y6G3 142 aaKnown RBP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 NUP205Q92621 2012 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 MATN3O15232 486 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 ANXA9O76027 345 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 CCNB1P14635 433 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 USP46P62068 366 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 NIPAL4Q0D2K0 466 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 TIFABQ6ZNK6 161 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 SH2D5Q6ZV89 423 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 TRPM8Q7Z2W7 1104 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 CHSY1Q86X52 802 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 C10orf67Q8IYJ2 551 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 IGSF21Q96ID5 467 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 ZBED2Q9BTP6 218 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 PPARGC1AQ9UBK2 798 aaKnown RBP23.13■■□□□ 1.29
CCDC47-204ENST00000582252 PHTF1Q9UMS5 762 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 INSL6Q9Y581 213 aa23.13■■□□□ 1.29
CCDC47-204ENST00000582252 GREB1Q4ZG55 1949 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 CACNG3O60359 315 aa23.12■■□□□ 1.29
CCDC47-204ENST00000582252 NEBLO76041 1014 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms