RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	SIK2	Q9H0K1	926 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	APEX2	Q9UBZ4	518 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RWDD2A	Q9UIY3	292 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SARDH	Q9UL12	918 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FZD4	Q9ULV1	537 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SNX10	Q9Y5X0	201 aa		11.98	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114		A0A1W2PR77	199 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TRABD2B	A6NFA1	517 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	HSF2BP	O75031	334 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ITGAV	P06756	1048 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLC2A3	P11169	496 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TFE3	P19532	575 aa	Predicted RBP	11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PON1	P27169	355 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CCR5	P51681	352 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	RNASE9	P60153	205 aa	Known RBP	11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CYP4F3	Q08477	520 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ZNF177	Q13360	481 aa	Predicted RBP	11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLC12A1	Q13621	1099 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	INAVA	Q3KP66	663 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PTPN20	Q4JDL3	420 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	HSP90AA4P	Q58FG1	418 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	EFHC1	Q5JVL4	640 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	OLFML1	Q6UWY5	402 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114		Q6ZVU0	165 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLC47A2	Q86VL8	602 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	EID2	Q8N6I1	236 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SHC3	Q92529	594 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SKA1	Q96BD8	255 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CNDP2	Q96KP4	475 aa	Known RBP	11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SPAG5	Q96R06	1193 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SYNC	Q9H7C4	482 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GDF3	Q9NR23	364 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	KIAA1468	Q9P260	1216 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SLC25A13	Q9UJS0	675 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CA5B	Q9Y2D0	317 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	HS3ST4	Q9Y661	456 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	NBEA	Q8NFP9	2946 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ADAMTS20	P59510	1910 aa		11.97	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GOLGA4	Q13439	2230 aa	Known RBP	11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114		M0QYT0	321 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ENC1	O14682	589 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DFNA5	O60443	496 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PAGE1	O75459	146 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DAB1	O75553	588 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	CNTN5	O94779	1100 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	LDOC1	O95751	146 aa	Predicted RBP	11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GLI1	P08151	1106 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ZNF18	P17022	549 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	KRT9	P35527	623 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PTK2	Q05397	1052 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SULT2A1	Q06520	285 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	BNIP3	Q12983	259 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DLG2	Q15700	870 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TPD52L1	Q16890	204 aa	Predicted RBP	11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	OTUD1	Q5VV17	481 aa	Predicted RBP	11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	IRF2BP1	Q8IU81	584 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	GALNT15	Q8N3T1	639 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	OR8D1	Q8WZ84	308 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	KLK6	Q92876	244 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ALG14	Q96F25	216 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FAM81B	Q96LP2	452 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MYOC	Q99972	504 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	FEM1A	Q9BSK4	669 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	MUC3B	Q9H195	1237 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	SIX2	Q9NPC8	291 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	ASNSD1	Q9NWL6	643 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	VPS28	Q9UK41	221 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	DNAJC12	Q9UKB3	198 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	PCDHGC3	Q9UN70	934 aa		11.96	□□□□□ -0.49
CDK5RAP3-223	ENST00000582114	LOC400499	M0QZD8	3231 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TLR4	O00206	839 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	FOXN3	O00409	490 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SNAP91	O60641	907 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ADCY5	O95622	1261 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	MT-CO1	P00395	513 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	CLCN1	P35523	988 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PLK1	P53350	603 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	NXPH1	P58417	271 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SLC6A3	Q01959	620 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	CNTN1	Q12860	1018 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SMAD1	Q15797	465 aa	Known RBP	11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ALF	Q53S48	1182 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PRPF39	Q86UA1	669 aa	Known RBP	11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SPATS2	Q86XZ4	545 aa	Known RBP	11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PIP4K2C	Q8TBX8	421 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	SAP25	Q8TEE9	199 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	NOX5	Q96PH1	765 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TKTL2	Q9H0I9	626 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ANLN	Q9NQW6	1124 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	TMPRSS4	Q9NRS4	437 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	PIGV	Q9NUD9	493 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ARHGAP20	Q9P2F6	1191 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	OR51B4	Q9Y5P0	310 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	DOCK9	Q9BZ29	2069 aa		11.95	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	C10orf142	B7Z368	130 aa		11.94	□□□□□ -0.5
CDK5RAP3-223	ENST00000582114	C1QTNF3-AMACR	E9PGA6	284 aa		11.94	□□□□□ -0.5

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