RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 XPO7Q9UIA9 1087 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 HS3ST4Q9Y661 456 aa13.88□□□□□ -0.19
CSNK1D-220ENST00000581737 PDE2AO00408 941 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 TRDMT1O14717 391 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 NCAM2O15394 837 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 TSPAN3O60637 253 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 LRCH4O75427 683 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 FGGP02679 453 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 TNFRSF8P28908 595 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 MIPP30301 263 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 SLC6A4P31645 630 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 HTR7P34969 479 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 SSR1P43307 286 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 SOX9P48436 509 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 GRSF1Q12849 480 aaKnown RBP eCLIP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 AUHQ13825 339 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 DHX34Q14147 1143 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 LRRC32Q14392 662 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 GAB4Q2WGN9 574 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 LRRC38Q5VT99 294 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 GRAMD4Q6IC98 578 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 PRR23BQ6ZRT6 265 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 ETFBKMTQ8IXQ9 262 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 EIF1ADQ8N9N8 165 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 CD101Q93033 1021 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 BHMTQ93088 406 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 PRICKLE1Q96MT3 831 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 RPRD1AQ96P16 312 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 P2RY13Q9BPV8 354 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 RAB17Q9H0T7 212 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 GOLPH3Q9H4A6 298 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 LMAN1LQ9HAT1 526 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 SEMA4GQ9NTN9 838 aa13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 DNAJC17Q9NVM6 304 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-220ENST00000581737 ZZEF1O43149 2961 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 GOLGA6L7A0A1B0GV03 622 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 A0A1B0GVM2 712 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 TCAF2A6NFQ2 919 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 TBL1XO60907 577 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 TULP3O75386 442 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 APODP05090 189 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 KRT7P08729 469 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 DRD1P21728 446 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 HOXD9P28356 352 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 CHRNA3P32297 505 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 OPRD1P41143 372 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 ZNF135P52742 658 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 OXCT1P55809 520 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 CDH18Q13634 790 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 E2F5Q15329 346 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 BOLA3Q53S33 107 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 ZFYVE27Q5T4F4 411 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 LAIR1Q6GTX8 287 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 FBXL22Q6P050 247 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 CHST9Q7L1S5 443 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 KATNAL2Q8IYT4 538 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 CCDC185Q8N715 623 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 NETO1Q8TDF5 533 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 MS4A14Q96JA4 679 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 BTBD6Q96KE9 485 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 PNKPQ96T60 521 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 EPAS1Q99814 870 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 FAM126AQ9BYI3 521 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 RETREG1Q9H6L5 497 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 ARHGEF4Q9NR80 690 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 RBM12Q9NTZ6 932 aaKnown RBP13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 OR12D3Q9UGF7 316 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 FEZ2Q9UHY8 353 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 VANGL2Q9ULK5 521 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 FZD10Q9ULW2 581 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 AP4E1Q9UPM8 1137 aa13.86□□□□□ -0.19
CSNK1D-220ENST00000581737 DOCK4Q8N1I0 1966 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 IGLV3-10A0A075B6K4 115 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 FAM187AA6NFU0 413 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 CHURC1-FNTBB4DL54 471 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 E9PAM4 449 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 I6L893 689 aaPredicted RBP13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 CLDN11O75508 207 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 LUC7L3O95232 432 aaKnown RBP13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 RETP07949 1114 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 CHRNB1P11230 501 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 L1CAMP32004 1257 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 GRIA2P42262 883 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 FNTBP49356 437 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 DGKGP49619 791 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 COPS2P61201 443 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 RPS24P62847 133 aaKnown RBP13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 CUL1Q13616 776 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 PON2Q15165 354 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 C5orf22Q49AR2 442 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 FBXO43Q4G163 708 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 RAB6CQ53S08 254 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 TMEM196Q5HYL7 178 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 DGKKQ5KSL6 1271 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 ERMARDQ5T6L9 678 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 RNF43Q68DV7 783 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 TXNDC11Q6PKC3 985 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 MAMSTRQ6ZN01 415 aa13.85□□□□□ -0.19
CSNK1D-220ENST00000581737 PRR23CQ6ZRP0 262 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms