RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 UNC45BQ8IWX7 931 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 APCDD1Q8J025 514 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 CFAP52Q8N1V2 620 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 ANKRD52Q8NB46 1076 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 SLC4A11Q8NBS3 891 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 GOLGA5Q8TBA6 731 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 TAS1R2Q8TE23 839 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 TATDN2Q93075 761 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 DHX58Q96C10 678 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 IPO9Q96P70 1041 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 NOX5Q96PH1 765 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 SPAG5Q96R06 1193 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 SEMA3CQ99985 751 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 CUEDC2Q9H467 287 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 FZD3Q9NPG1 666 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 ABCC13Q9NSE7 274 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 DMAC2Q9NW81 257 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 DNAJC28Q9NX36 388 aa12.98□□□□□ -0.33
CSNK1D-218ENST00000581655 CCDC187A0A096LP49 1063 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 IKBKBO14920 756 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 LUC7L3O95232 432 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 CD2BP2O95400 341 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 NNMTP40261 264 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 RAD23BP54727 409 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 INHBCP55103 352 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 TBX4P57082 545 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 CLDN2P57739 230 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 HNRNPKP61978 463 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 DRAP1Q14919 205 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 C4orf17Q53FE4 359 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 ZCCHC8Q6NZY4 707 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 MSANTD2Q6P1R3 559 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 SLC22A18ASQ8N1D0 253 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 USP28Q96RU2 1077 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 C7orf25Q9BPX7 421 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 BLZF1Q9H2G9 400 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 PREBQ9HCU5 417 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 ICE1Q9Y2F5 2266 aa12.97□□□□□ -0.33
CSNK1D-218ENST00000581655 A0A1W2PQU0 124 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 EME2A4GXA9 379 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 XPO1O14980 1071 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 CASC3O15234 703 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 PPFIA2O75334 1257 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 AKT2P31751 481 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 GCLMP48507 274 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 TAS2R38P59533 333 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 SLC39A14Q15043 492 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 RABEP1Q15276 862 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 GOLGA7BQ2TAP0 167 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 DCAF6Q58WW2 860 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 FAM46CQ5VWP2 391 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 CEP135Q66GS9 1140 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 DSG4Q86SJ6 1040 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 SLC9A9Q8IVB4 645 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 SIX6OS1Q8N1H7 587 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 ZNF548Q8NEK5 533 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 TPCN2Q8NHX9 752 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 OR8D1Q8WZ84 308 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 IFT43Q96FT9 208 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 DDX50Q9BQ39 737 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 NUCKS1Q9H1E3 243 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 IGSF5Q9NSI5 407 aa12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-218ENST00000581655 TRPM6Q9BX84 2022 aa12.96□□□□□ -0.34
CSNK1D-218ENST00000581655 C1QTNF3-AMACRE9PGA6 284 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 NOBOXO60393 691 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 TCEA3O75764 348 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 TRIM49P0CI25 452 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 TRIM49CP0CI26 452 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 HNRNPA2B1P22626 353 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 SLC5A2P31639 672 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 VAMP7P51809 220 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 PDX1P52945 283 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 DAOAP59103 153 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 PPP3CAQ08209 521 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 TBR1Q16650 682 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 MS4A13Q5J8X5 152 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 PERM1Q5SV97 790 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 OR6B2Q6IFH4 312 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 GCNT7Q6ZNI0 430 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 C14orf80Q86SX3 495 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 JAMLQ86YT9 394 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 FRS2Q8WU20 508 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 SLC25A18Q9H1K4 315 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 SYNDIG1Q9H7V2 258 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 MMRN2Q9H8L6 949 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 CISHQ9NSE2 258 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 TSPAN16Q9UKR8 245 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 MAN2B2Q9Y2E5 1009 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 PAXBP1Q9Y5B6 917 aa12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 MORC2Q9Y6X9 1032 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-218ENST00000581655 CLEC18AA5D8T8 446 aa12.94□□□□□ -0.34
CSNK1D-218ENST00000581655 PLD2O14939 933 aa12.94□□□□□ -0.34
CSNK1D-218ENST00000581655 MUSKO15146 869 aa12.94□□□□□ -0.34
CSNK1D-218ENST00000581655 NR3C1P04150 777 aa12.94□□□□□ -0.34
CSNK1D-218ENST00000581655 LCP1P13796 627 aa12.94□□□□□ -0.34
CSNK1D-218ENST00000581655 AFMP43652 599 aa12.94□□□□□ -0.34
CSNK1D-218ENST00000581655 BST2Q10589 180 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-218ENST00000581655 SERINC3Q13530 473 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms