RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 FCRL2Q96LA5 508 aaPredicted RBP13.15□□□□□ -0.3
SS18-219ENST00000581570 SLC46A1Q96NT5 459 aa13.15□□□□□ -0.3
SS18-219ENST00000581570 FAM117AQ9C073 453 aa13.15□□□□□ -0.3
SS18-219ENST00000581570 EVA1BQ9NVM1 165 aa13.15□□□□□ -0.3
SS18-219ENST00000581570 NLGN3Q9NZ94 848 aa13.15□□□□□ -0.3
SS18-219ENST00000581570 SATB2Q9UPW6 733 aa13.15□□□□□ -0.3
SS18-219ENST00000581570 HEMK1Q9Y5R4 338 aaPredicted RBP13.15□□□□□ -0.3
SS18-219ENST00000581570 ARID1BQ8NFD5 2236 aaPredicted RBP13.15□□□□□ -0.31
SS18-219ENST00000581570 PIK3R2O00459 728 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 SLC31A1O15431 190 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 PIAS2O75928 621 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 LTFP02788 710 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 VDRP11473 427 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 NUMBP49757 651 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 RGS7P49802 495 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 MXI1P50539 228 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 SKOR1P84550 965 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 SRSF1Q07955 248 aaKnown RBP eCLIP13.14□□□□□ -0.31
SS18-219ENST00000581570 CNTN1Q12860 1018 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 ISXQ2M1V0 245 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 AGBL4Q5VU57 503 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 RESP18Q5W5W9 173 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 LURAP1LQ8IV03 231 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 LGI2Q8N0V4 545 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 IFI44Q8TCB0 444 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 MYOCQ99972 504 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 CAAP1Q9H8G2 361 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 USP29Q9HBJ7 922 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 SARDHQ9UL12 918 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
SS18-219ENST00000581570 NAV2Q8IVL1 2488 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 LY6G6EA0A0G2JKS1 128 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 NEMP2A6NFY4 417 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 C1QTNF3-AMACRE9PGA6 284 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 O00370 1275 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 LZTS3O60299 673 aaPredicted RBP13.13□□□□□ -0.31
SS18-219ENST00000581570 MOCS2O96007 188 aaPredicted RBP13.13□□□□□ -0.31
SS18-219ENST00000581570 RPL13P26373 211 aaKnown RBP13.13□□□□□ -0.31
SS18-219ENST00000581570 ME1P48163 572 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 NUCB2P80303 420 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 SULT2A1Q06520 285 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 ADAM9Q13443 819 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 SLC12A1Q13621 1099 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 PMF1Q6P1K2 205 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 TMEM145Q8NBT3 493 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 CLEC4CQ8WTT0 213 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 FRS2Q8WU20 508 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 KLK6Q92876 244 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 GRAMD1AQ96CP6 724 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 EEF2KMTQ96G04 330 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 SERPINB11Q96P15 392 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 DUSP23Q9BVJ7 150 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 TRIM4Q9C037 500 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 PREBQ9HCU5 417 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 KIAA1257Q9ULG3 409 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 PPM1HQ9ULR3 514 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 TLR6Q9Y2C9 796 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 U3KQA8 63 aa13.13□□□□□ -0.31
SS18-219ENST00000581570 A0A1W2PNU3 283 aaPredicted RBP13.12□□□□□ -0.31
SS18-219ENST00000581570 K7ESM1 405 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 SCAMP1O15126 338 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 ACTN4O43707 911 aaKnown RBP13.12□□□□□ -0.31
SS18-219ENST00000581570 STX10O60499 249 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 PDGFRAP16234 1089 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 PRLRP16471 622 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 ZNF18P17022 549 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 TGM2P21980 687 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 MCCD1P59942 119 aaPredicted RBP13.12□□□□□ -0.31
SS18-219ENST00000581570 YWHAEP62258 255 aaKnown RBP13.12□□□□□ -0.31
SS18-219ENST00000581570 NNTQ13423 1086 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 CUL2Q13617 745 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 ZSCAN23Q3MJ62 389 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 ARL13BQ3SXY8 428 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 ACCSLQ4AC99 568 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 RAP1GAP2Q684P5 730 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 EXD3Q8N9H8 876 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 OR13H1Q8NG92 308 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 DQX1Q8TE96 717 aaKnown RBP13.12□□□□□ -0.31
SS18-219ENST00000581570 SLC35F5Q8WV83 523 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 ATXN7L3BQ96GX2 97 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 SLC39A13Q96H72 371 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 PRR11Q96HE9 360 aaPredicted RBP13.12□□□□□ -0.31
SS18-219ENST00000581570 INTS4Q96HW7 963 aaKnown RBP13.12□□□□□ -0.31
SS18-219ENST00000581570 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.12□□□□□ -0.31
SS18-219ENST00000581570 TJP2Q9UDY2 1190 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 XPO7Q9UIA9 1087 aaKnown RBP13.12□□□□□ -0.31
SS18-219ENST00000581570 MAPK8IP1Q9UQF2 711 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 PCDHGA8Q9Y5G5 932 aa13.12□□□□□ -0.31
SS18-219ENST00000581570 A0A1W2PQU0 124 aa13.11□□□□□ -0.31
SS18-219ENST00000581570 CPED1A4D0V7 1026 aa13.11□□□□□ -0.31
SS18-219ENST00000581570 CDRT15L2A8MXV6 281 aa13.11□□□□□ -0.31
SS18-219ENST00000581570 NEBLO76041 1014 aa13.11□□□□□ -0.31
SS18-219ENST00000581570 FYNP06241 537 aa13.11□□□□□ -0.31
SS18-219ENST00000581570 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
SS18-219ENST00000581570 TACR2P21452 398 aa13.11□□□□□ -0.31
SS18-219ENST00000581570 AKT2P31751 481 aa13.11□□□□□ -0.31
SS18-219ENST00000581570 TAS2R38P59533 333 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms