RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 PRKAG3Q9UGI9 489 aa20.73■□□□□ 0.91
SMG8-203ENST00000578922 STK10O94804 968 aaKnown RBP20.72■□□□□ 0.91
SMG8-203ENST00000578922 MX2P20592 715 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 HOXC13P31276 330 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 FAM133BQ5BKY9 247 aaKnown RBP20.72■□□□□ 0.91
SMG8-203ENST00000578922 ZNF567Q8N184 647 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 C1orf74Q96LT6 269 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 TGS1Q96RS0 853 aaKnown RBP20.72■□□□□ 0.91
SMG8-203ENST00000578922 LBHD1Q9BQE6 289 aaPredicted RBP20.72■□□□□ 0.91
SMG8-203ENST00000578922 FERMT1Q9BQL6 677 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 CHADO15335 359 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 FGF10O15520 208 aaPredicted RBP20.72■□□□□ 0.91
SMG8-203ENST00000578922 CNTN5O94779 1100 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 UBOX5O94941 541 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 IGLV3-27P01718 113 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 IL9RQ01113 521 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 PPIDQ08752 370 aaKnown RBP20.72■□□□□ 0.91
SMG8-203ENST00000578922 BNIP1Q12981 228 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 MPP2Q14168 576 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 CIR1Q86X95 450 aaPredicted RBP20.72■□□□□ 0.91
SMG8-203ENST00000578922 CYP4X1Q8N118 509 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 SP7Q8TDD2 431 aaPredicted RBP20.72■□□□□ 0.91
SMG8-203ENST00000578922 DPF3Q92784 378 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 MYRFLQ96LU7 910 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 ZNF334Q9HCZ1 680 aaPredicted RBP20.72■□□□□ 0.91
SMG8-203ENST00000578922 GKN1Q9NS71 199 aa20.72■□□□□ 0.91
SMG8-203ENST00000578922 SHROOM3Q8TF72 1996 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 HIDE1A8MVS5 230 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 GRXCR1A8MXD5 290 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 NCAM2O15394 837 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 ARHGEF15O94989 841 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 IRF1P10914 325 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 DNAJB1P25685 340 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 BMPR1AP36894 532 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 RNF43Q68DV7 783 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 FBXL22Q6P050 247 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 PID1Q7Z2X4 250 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 CHSY1Q86X52 802 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 ARHGAP12Q8IWW6 846 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 PDIK1LQ8N165 341 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 OVCA2Q8WZ82 227 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 MAML1Q92585 1016 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 IGSF8Q969P0 613 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 MYEOVQ96EZ4 313 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 SLC39A8Q9C0K1 460 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 RNF38Q9H0F5 515 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 NOD2Q9HC29 1040 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 SENP1Q9P0U3 644 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 KLHL8Q9P2G9 620 aaPredicted RBP20.71■□□□□ 0.91
SMG8-203ENST00000578922 RAD54BQ9Y620 910 aa20.71■□□□□ 0.91
SMG8-203ENST00000578922 FAM47DPA6NHR8 397 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 PTPN3P26045 913 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 PSMB4P28070 264 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 NUMBP49757 651 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 NCALDP61601 193 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 CREMQ03060 361 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 CCDC15Q0P6D6 951 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 ALFQ53S48 1182 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 SNX30Q5VWJ9 437 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 NADSYN1Q6IA69 706 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 SRRM1Q8IYB3 904 aaKnown RBP20.7■□□□□ 0.91
SMG8-203ENST00000578922 ZNF683Q8IZ20 524 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.7■□□□□ 0.91
SMG8-203ENST00000578922 RTL3Q8N8U3 475 aaKnown RBP20.7■□□□□ 0.91
SMG8-203ENST00000578922 PSMG2Q969U7 264 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 HDAC11Q96DB2 347 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 AGAP3Q96P47 875 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 KLHL5Q96PQ7 755 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 CDK5RAP1Q96SZ6 601 aaKnown RBP20.7■□□□□ 0.91
SMG8-203ENST00000578922 WDR83Q9BRX9 315 aaKnown RBP20.7■□□□□ 0.91
SMG8-203ENST00000578922 VPS37BQ9H9H4 285 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 TRPC7Q9HCX4 862 aa20.7■□□□□ 0.91
SMG8-203ENST00000578922 MYO7AQ13402 2215 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 NQO1P15559 274 aaKnown RBP20.7■□□□□ 0.9
SMG8-203ENST00000578922 SKIV2L2P42285 1042 aaKnown RBP20.7■□□□□ 0.9
SMG8-203ENST00000578922 ZBTB17Q13105 803 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 RASA2Q15283 850 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 TTC16Q8NEE8 873 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 PHOSPHO2Q8TCD6 241 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 USP33Q8TEY7 942 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 TRMT2BQ96GJ1 504 aaKnown RBP20.7■□□□□ 0.9
SMG8-203ENST00000578922 RPRD1AQ96P16 312 aaPredicted RBP20.7■□□□□ 0.9
SMG8-203ENST00000578922 CYP2S1Q96SQ9 504 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 ECT2Q9H8V3 914 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 SMPD4Q9NXE4 827 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 KLHL14Q9P2G3 628 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 MCM8Q9UJA3 840 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 SSX2IPQ9Y2D8 614 aa20.7■□□□□ 0.9
SMG8-203ENST00000578922 LINC01553A4QN01 128 aa20.69■□□□□ 0.9
SMG8-203ENST00000578922 RASA4BC9J798 803 aa20.69■□□□□ 0.9
SMG8-203ENST00000578922 ALOX15BO15296 676 aa20.69■□□□□ 0.9
SMG8-203ENST00000578922 RASA4O43374 803 aa20.69■□□□□ 0.9
SMG8-203ENST00000578922 HTR7P34969 479 aa20.69■□□□□ 0.9
SMG8-203ENST00000578922 NRG1Q02297 640 aaPredicted RBP20.69■□□□□ 0.9
SMG8-203ENST00000578922 RING1Q06587 406 aa20.69■□□□□ 0.9
SMG8-203ENST00000578922 FAM109BQ6ICB4 259 aaPredicted RBP20.69■□□□□ 0.9
SMG8-203ENST00000578922 RFWD3Q6PCD5 774 aa20.69■□□□□ 0.9
SMG8-203ENST00000578922 C4orf22Q6V702 233 aa20.69■□□□□ 0.9
SMG8-203ENST00000578922 TMEM150AQ86TG1 271 aa20.69■□□□□ 0.9
SMG8-203ENST00000578922 ATPAF2Q8N5M1 289 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms