RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 ZSCAN23Q3MJ62 389 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 DCAF6Q58WW2 860 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 MS4A13Q5J8X5 152 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 KRT39Q6A163 491 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 IGF2-ASQ6U949 168 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 ATG14Q6ZNE5 492 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 FAM186BQ8IYM0 893 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 GRAMD1CQ8IYS0 662 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 CEP57L1Q8IYX8 460 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 APCDD1Q8J025 514 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 EXD3Q8N9H8 876 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 UBA3Q8TBC4 463 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 IFI44Q8TCB0 444 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 KCTD13Q8WZ19 329 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 OR8D1Q8WZ84 308 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 GRAMD1AQ96CP6 724 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 MYEOVQ96EZ4 313 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 ATXN7L3BQ96GX2 97 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 ZNF396Q96N95 335 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-210ENST00000578916 SLC46A1Q96NT5 459 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 DUSP23Q9BVJ7 150 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 CALN1Q9BXU9 219 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
PTPRM-210ENST00000578916 TMEM8AQ9HCN3 771 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 FAM13BQ9NYF5 915 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 MTMR6Q9Y217 621 aa9.41□□□□□ -0.9
PTPRM-210ENST00000578916 C1QTNF3-AMACRE9PGA6 284 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 SCAMP1O15126 338 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 KLRC4O43908 158 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 YEATS4O95619 227 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 MOCS2O96007 188 aaPredicted RBP9.4□□□□□ -0.9
PTPRM-210ENST00000578916 NTRK1P04629 796 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 GIMD1P0DJR0 217 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 SETSIPP0DME0 302 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 PRLRP16471 622 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 ZNF18P17022 549 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 NR2F2P24468 414 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 AKT2P31751 481 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 PSMC2P35998 433 aaKnown RBP9.4□□□□□ -0.9
PTPRM-210ENST00000578916 NUMBP49757 651 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 METAP1P53582 386 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 NUCB2P80303 420 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 SKOR1P84550 965 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 SULT2A1Q06520 285 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 CNTN1Q12860 1018 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 ARL13BQ3SXY8 428 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 ACCSLQ4AC99 568 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 AGBL4Q5VU57 503 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 XKR5Q6UX68 686 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 ZNF574Q6ZN55 896 aaPredicted RBP9.4□□□□□ -0.9
PTPRM-210ENST00000578916 LGI2Q8N0V4 545 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 SCML4Q8N228 414 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 ARL14Q8N4G2 192 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 TMEM145Q8NBT3 493 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 IRGQQ8WZA9 623 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 SEMA4DQ92854 862 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 KLK6Q92876 244 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 FAM131CQ96AQ9 280 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 SPATA32Q96LK8 384 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 CCNL2Q96S94 520 aaPredicted RBP9.4□□□□□ -0.9
PTPRM-210ENST00000578916 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
PTPRM-210ENST00000578916 PREBQ9HCU5 417 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 RAB20Q9NX57 234 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 TJP2Q9UDY2 1190 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 SARDHQ9UL12 918 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 PCDHGA8Q9Y5G5 932 aa9.4□□□□□ -0.9
PTPRM-210ENST00000578916 TP53BP1Q12888 1972 aaPredicted RBP9.4□□□□□ -0.9
PTPRM-210ENST00000578916 LY6G6EA0A0G2JKS1 128 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 A0A1W2PNU3 283 aaPredicted RBP9.39□□□□□ -0.91
PTPRM-210ENST00000578916 A0A1W2PQU0 124 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 CPED1A4D0V7 1026 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 K7ESM1 405 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 PIK3R2O00459 728 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 TERTO14746 1132 aaKnown RBP9.39□□□□□ -0.91
PTPRM-210ENST00000578916 LZTS3O60299 673 aaPredicted RBP9.39□□□□□ -0.91
PTPRM-210ENST00000578916 TNFSF15O95150 251 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 LTFP02788 710 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 VDRP11473 427 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 TGM2P21980 687 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 RPL13P26373 211 aaKnown RBP9.39□□□□□ -0.91
PTPRM-210ENST00000578916 GTF2H1P32780 548 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 RGS7P49802 495 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 HNRNPKP61978 463 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTPRM-210ENST00000578916 ENPEPQ07075 957 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 CLN3Q13286 438 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 SLC12A1Q13621 1099 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 ZNF542PQ5EBM4 170 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 RBM44Q6ZP01 1051 aaKnown RBP9.39□□□□□ -0.91
PTPRM-210ENST00000578916 USP53Q70EK8 1073 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 EFL1Q7Z2Z2 1120 aaKnown RBP9.39□□□□□ -0.91
PTPRM-210ENST00000578916 FBXL13Q8NEE6 735 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 OR13H1Q8NG92 308 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 ARRDC3Q96B67 414 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 FCRL2Q96LA5 508 aaPredicted RBP9.39□□□□□ -0.91
PTPRM-210ENST00000578916 SERPINB11Q96P15 392 aa9.39□□□□□ -0.91
PTPRM-210ENST00000578916 FZD3Q9NPG1 666 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms