RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 KRT83P78385 493 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 SEMG2Q02383 582 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 C19orf57Q0VDD7 668 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 KCNH2Q12809 1159 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 TARDBPQ13148 414 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 DNAJC3Q13217 504 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 KCNJ12Q14500 433 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 PRAMEF14Q5SWL7 426 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 SMYD5Q6GMV2 418 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 TMEM110Q86TL2 294 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 MARCH9Q86YJ5 346 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 ELOA2Q8IYF1 753 aaPredicted RBP14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 APCDD1Q8J025 514 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 PIP4K2CQ8TBX8 421 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 NELFBQ8WX92 580 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 KAT5Q92993 513 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 INTS2Q9H0H0 1204 aaKnown RBP14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 DDIT4Q9NX09 232 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 VPS28Q9UK41 221 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 CNTN6Q9UQ52 1028 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 PAXBP1Q9Y5B6 917 aa14.63□□□□□ -0.07
SMARCD2-205ENST00000577686 ASPMQ8IZT6 3477 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 PLXNB3Q9ULL4 1909 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 HSF2BPO75031 334 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 CLDN11O75508 207 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 STK19P49842 368 aaPredicted RBP14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 DAB2P98082 770 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 RTP5Q14D33 572 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 ACBD5Q5T8D3 534 aaPredicted RBP14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 SYPL2Q5VXT5 272 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 DENND1BQ6P3S1 775 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 FBXL19Q6PCT2 694 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 ARHGEF19Q8IW93 802 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 LSM14AQ8ND56 463 aaKnown RBP14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 LMO3Q8TAP4 145 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 FAM174AQ8TBP5 190 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 ZNF606Q8WXB4 792 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 TSC1Q92574 1164 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 KLHDC7BQ96G42 594 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 EBF2Q9HAK2 575 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 UBE2TQ9NPD8 197 aaPredicted RBP14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 CLCA2Q9UQC9 943 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 DMXL2Q8TDJ6 3036 aa14.62□□□□□ -0.07
SMARCD2-205ENST00000577686 ACACAQ13085 2346 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 CAPN8A6NHC0 703 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 MCF2LO15068 1137 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 ATP9BO43861 1147 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 IGLV3-25P01717 112 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 GLDCP23378 1020 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 MAT2AP31153 395 aaKnown RBP14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 DRD3P35462 400 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 EIF2S3P41091 472 aaKnown RBP14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 PPP2CBP62714 309 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 PPP2CAP67775 309 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 PAK1Q13153 545 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 PDCLQ13371 301 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 SHBQ15464 509 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 SFMBT2Q5VUG0 894 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 TTI2Q6NXR4 508 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 NEK5Q6P3R8 708 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 TRIM59Q8IWR1 403 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 SNIP1Q8TAD8 396 aaKnown RBP14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 FAM131CQ96AQ9 280 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 MYEOVQ96EZ4 313 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 PPP1R16AQ96I34 528 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 C2orf49Q9BVC5 232 aaPredicted RBP14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 MUC3BQ9H195 1237 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 SYNCQ9H7C4 482 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 RRN3Q9NYV6 651 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 XPO7Q9UIA9 1087 aaKnown RBP14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 CTNND2Q9UQB3 1225 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 ITPR1Q14643 2758 aa14.61□□□□□ -0.07
SMARCD2-205ENST00000577686 APC2O95996 2303 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 SYNJ2BP-COX16A0A087WUM0 186 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 RIOK3O14730 519 aaKnown RBP14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 RTN2O75298 545 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 ACP1P24666 158 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 AKT2P31751 481 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 USP8P40818 1118 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 RECQLP46063 649 aaPredicted RBP14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 MARSP56192 900 aaKnown RBP14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 ZNF211Q13398 564 aaPredicted RBP14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 BECN1Q14457 450 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 DLG2Q15700 870 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 FBXL22Q6P050 247 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 FRS2Q8WU20 508 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 RFFLQ8WZ73 363 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 FGF11Q92914 225 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 KREMEN1Q96MU8 473 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 PRMT1Q99873 361 aaKnown RBP14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 COX16Q9P0S2 106 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 MAN1B1Q9UKM7 699 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 TMEM131Q92545 1883 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 NUMA1Q14980 2115 aa14.6□□□□□ -0.07
SMARCD2-205ENST00000577686 NEMP2A6NFY4 417 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 C10orf142B7Z368 130 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 CBX4O00257 560 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 BNIP3LO60238 219 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 PRNPP04156 253 aa14.59□□□□□ -0.07
SMARCD2-205ENST00000577686 DUSP3P51452 185 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms