RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 DOCK4Q8N1I0 1966 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 GOLGA6L7A0A1B0GV03 622 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 F5H5T6 163 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 H3BRJ5 948 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KCNK3O14649 394 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DCLK1O15075 740 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 HOXC11O43248 304 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CLDN11O75508 207 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 IRF1P10914 325 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZFXP17010 805 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 GOT1P17174 413 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RPS9P46781 194 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CDH4P55283 916 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PRKCQQ04759 706 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TFDP2Q14188 446 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PAFAH1B3Q15102 231 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RABGAP1LQ5R372 815 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 FYB2Q5VWT5 728 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 AFMIDQ63HM1 303 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RAP1GAP2Q684P5 730 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RHBDF2Q6PJF5 856 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MAMSTRQ6ZN01 415 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KIAA0907Q7Z7F0 614 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SETD3Q86TU7 594 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CREG2Q8IUH2 290 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 UMODL1-AS1Q8N2C9 162 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PQLC3Q8N755 202 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZNF557Q8N988 423 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KIF18AQ8NI77 898 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TBC1D31Q96DN5 1066 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TMA16Q96EY4 203 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MYEOVQ96EZ4 313 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SLC2A11Q9BYW1 496 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 OSBPL8Q9BZF1 889 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KLC2Q9H0B6 622 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SIK2Q9H0K1 926 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CATSPERBQ9H7T0 1116 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SPHK2Q9NRA0 654 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 GPATCH2LQ9NWQ4 482 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DUS2Q9NX74 493 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 STIM2Q9P246 746 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RAD54BQ9Y620 910 aa11.45□□□□□ -0.58
CDK5RAP3-204ENST00000577664 A0A1B0GVM2 712 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 LRRD1A4D1F6 860 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TCAF2A6NFQ2 919 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 EEF2KO00418 725 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TJP3O95049 919 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MOCS2O96007 188 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KRT1P04264 644 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ERCC2P18074 760 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 EPHB2P29323 1055 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NR2C2P49116 596 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MAPKAPK2P49137 400 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NDST2P52849 883 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PLK1P53350 603 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NRLP54845 237 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TPI1P60174 286 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZNF33AQ06730 810 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MMRN1Q13201 1228 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 KRT81Q14533 505 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 DHCR24Q15392 516 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PPP6R3Q5H9R7 873 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZNF783Q6ZMS7 281 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZNF572Q7Z3I7 529 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TMEM25Q86YD3 366 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SLC13A5Q86YT5 568 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 LRRC49Q8IUZ0 686 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 LGI2Q8N0V4 545 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PLD5Q8N7P1 536 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RTL3Q8N8U3 475 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 FIBINQ8TAL6 211 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 MAIP1Q8WWC4 291 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ZCCHC14Q8WYQ9 949 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ATP2A3Q93084 1043 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 P2RY11Q96G91 374 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 LMLNQ96KR4 655 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 PRICKLE1Q96MT3 831 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 RPP25Q9BUL9 199 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TRMT61BQ9BVS5 477 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 FRMD8P1Q9BZ68 369 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 ARHGEF4Q9NR80 690 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 VANGL2Q9ULK5 521 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SNX10Q9Y5X0 201 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NUMBLQ9Y6R0 609 aa11.44□□□□□ -0.58
CDK5RAP3-204ENST00000577664 A0A0A0MRY4 1105 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 APOC4-APOC2K7ER74 178 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NCAM2O15394 837 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CREB3O43889 395 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 SRGAP2O75044 1071 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 NFATC1O95644 943 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 APOC2P02655 101 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 CYBBP04839 570 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 TGM2P21980 687 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 AMPD1P23109 780 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 HOXD9P28356 352 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 EIF2DP41214 584 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 OXCT1P55809 520 aa11.43□□□□□ -0.58
CDK5RAP3-204ENST00000577664 YBEYP58557 167 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms