RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CD72P21854 359 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 MZF1P28698 734 aaPredicted RBP17.51■□□□□ 0.39
NUP88-210ENST00000574867 CCINQ13939 588 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 DGKKQ5KSL6 1271 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 MBLAC2Q68D91 279 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 ARHGEF2Q92974 986 aaKnown RBP17.51■□□□□ 0.39
NUP88-210ENST00000574867 ACDQ96AP0 544 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 OSBPL8Q9BZF1 889 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 MFSD1Q9H3U5 465 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 NOL6Q9H6R4 1146 aaKnown RBP17.51■□□□□ 0.39
NUP88-210ENST00000574867 ATP13A1Q9HD20 1204 aa17.51■□□□□ 0.39
NUP88-210ENST00000574867 INTS6Q9UL03 887 aaKnown RBP17.51■□□□□ 0.39
NUP88-210ENST00000574867 A0A0D9SEW6 157 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 ARHGAP42A6NI28 874 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 RASA4BC9J798 803 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 PRRT4C9JH25 899 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 ENC1O14682 589 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 RASA4O43374 803 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 ATP5BP06576 529 aaKnown RBP17.5■□□□□ 0.39
NUP88-210ENST00000574867 UBXN2BQ14CS0 331 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 SYNPOQ8N3V7 929 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 PLD5Q8N7P1 536 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 KCNV2Q8TDN2 545 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 TTC17Q96AE7 1141 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 CIPCQ9C0C6 399 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 ELOVL2Q9NXB9 296 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 STARD13Q9Y3M8 1113 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 RAD54BQ9Y620 910 aa17.5■□□□□ 0.39
NUP88-210ENST00000574867 CXorf51AA0A1B0GTR3 108 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 TNFRSF10AO00220 468 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 NCAM2O15394 837 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 MFSD11O43934 449 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 EGFP01133 1207 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 KRT10P13645 584 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 TGM2P21980 687 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 TARSP26639 723 aaKnown RBP17.49■□□□□ 0.39
NUP88-210ENST00000574867 ZNF211Q13398 564 aaPredicted RBP17.49■□□□□ 0.39
NUP88-210ENST00000574867 KAZNQ674X7 775 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 IL31Q6EBC2 164 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 BBS12Q6ZW61 710 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 ARHGAP12Q8IWW6 846 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 APCDD1Q8J025 514 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 ZNF687Q8N1G0 1237 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 OR7D4Q8NG98 312 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 CELF6Q96J87 481 aaKnown RBP17.49■□□□□ 0.39
NUP88-210ENST00000574867 ACE2Q9BYF1 805 aaPredicted RBP17.49■□□□□ 0.39
NUP88-210ENST00000574867 HPCAL4Q9UM19 191 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 MFHAS1Q9Y4C4 1052 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 K7EQS6 105 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 NPC1O15118 1278 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 CST8O60676 142 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 TJP3O95049 919 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 ATP1A1P05023 1023 aaKnown RBP17.49■□□□□ 0.39
NUP88-210ENST00000574867 TMEM215Q68D42 235 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 ZSCAN30Q86W11 494 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 LRRC49Q8IUZ0 686 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 PJA1Q8NG27 643 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 EZH1Q92800 747 aaPredicted RBP17.49■□□□□ 0.39
NUP88-210ENST00000574867 HMCESQ96FZ2 354 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 WDR24Q96S15 920 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 PSMB7Q99436 277 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 NAPGQ99747 312 aaPredicted RBP17.49■□□□□ 0.39
NUP88-210ENST00000574867 FOXQ1Q9C009 403 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 SLC39A8Q9C0K1 460 aa17.49■□□□□ 0.39
NUP88-210ENST00000574867 MUC22E2RYF6 1773 aaPredicted RBP17.49■□□□□ 0.39
NUP88-210ENST00000574867 TMEM221A6NGB7 291 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 M0R296 226 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 DLDP09622 509 aaKnown RBP17.48■□□□□ 0.39
NUP88-210ENST00000574867 ETF1P62495 437 aaKnown RBP17.48■□□□□ 0.39
NUP88-210ENST00000574867 SERINC3Q13530 473 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 NYAP1Q6ZVC0 841 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 BZW1Q7L1Q6 419 aaKnown RBP17.48■□□□□ 0.39
NUP88-210ENST00000574867 SPON2Q9BUD6 331 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 VPS51Q9UID3 782 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 TECTAO75443 2155 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 CTAGE9A4FU28 777 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 ZSCAN5CA6NGD5 496 aaPredicted RBP17.48■□□□□ 0.39
NUP88-210ENST00000574867 FAM170BA6NMN3 283 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 DFFAO00273 331 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 STK25O00506 426 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 CHRNB1P11230 501 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 MX2P20592 715 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 ACVRL1P37023 503 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 NR2C2P49116 596 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 GEMIN4P57678 1058 aaKnown RBP17.48■□□□□ 0.39
NUP88-210ENST00000574867 DYNLT1P63172 113 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 ECT2LQ008S8 904 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 RETSATQ6NUM9 610 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 TRMT11Q7Z4G4 463 aaKnown RBP17.48■□□□□ 0.39
NUP88-210ENST00000574867 ZNF354CQ86Y25 554 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 SFTPA1Q8IWL2 248 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 PBKQ96KB5 322 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 HEMGNQ9BXL5 484 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 COL25A1Q9BXS0 654 aaPredicted RBP17.48■□□□□ 0.39
NUP88-210ENST00000574867 DTLQ9NZJ0 730 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 SLC25A13Q9UJS0 675 aa17.48■□□□□ 0.39
NUP88-210ENST00000574867 NYNRINQ9P2P1 1898 aaKnown RBP17.47■□□□□ 0.39
NUP88-210ENST00000574867 APOC4-APOC2K7ER74 178 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 CBX4O00257 560 aa17.47■□□□□ 0.39
NUP88-210ENST00000574867 APOC2P02655 101 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms