RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ERP27Q96DN0 273 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS33B-208ENST00000574755 HCSTQ9UBK5 93 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 DCTN4Q9UJW0 460 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 NYNRINQ9P2P1 1898 aaKnown RBP14.34□□□□□ -0.11
VPS33B-208ENST00000574755 TET1Q8NFU7 2136 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 OR6C75A6NL08 312 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 TPP1O14773 563 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 MAFKO60675 156 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 RASSF9O75901 435 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 SOAT2O75908 522 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 USP1O94782 785 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 ALDOAP04075 364 aaKnown RBP14.34□□□□□ -0.11
VPS33B-208ENST00000574755 CDK7P50613 346 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 NCALDP61601 193 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 PDE1BQ01064 536 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 CDH17Q12864 832 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 MRPL58Q14197 206 aaKnown RBP14.34□□□□□ -0.11
VPS33B-208ENST00000574755 ANKLE1Q8NAG6 615 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 MFSD3Q96ES6 412 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 TRIM55Q9BYV6 548 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 IL22Q9GZX6 179 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 MYLK2Q9H1R3 596 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 CHKBQ9Y259 395 aa14.34□□□□□ -0.11
VPS33B-208ENST00000574755 AAR2Q9Y312 384 aaKnown RBP14.34□□□□□ -0.11
VPS33B-208ENST00000574755 TOP3BO95985 862 aaKnown RBP14.33□□□□□ -0.11
VPS33B-208ENST00000574755 SLC2A3P11169 496 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 TPH1P17752 444 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 YWHAQP27348 245 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 GP5P40197 560 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 NPY2RP49146 381 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 SLC11A1P49279 550 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 MLLT6P55198 1093 aaPredicted RBP14.33□□□□□ -0.11
VPS33B-208ENST00000574755 TBX4P57082 545 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 EFEMP1Q12805 493 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 MGAT5BQ3V5L5 792 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 ANKRD20A4Q4UJ75 823 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 PIK3R6Q5UE93 754 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 MSANTD2Q6P1R3 559 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 ZNF449Q6P9G9 518 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 C14orf80Q86SX3 495 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 LINC00523Q86TU6 105 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 RTL3Q8N8U3 475 aaKnown RBP14.33□□□□□ -0.11
VPS33B-208ENST00000574755 SPATA22Q8NHS9 363 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 ZNF296Q8WUU4 475 aaPredicted RBP14.33□□□□□ -0.11
VPS33B-208ENST00000574755 SEPT8Q92599 483 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 FBXO32Q969P5 355 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 SEPT5Q99719 369 aaPredicted RBP14.33□□□□□ -0.11
VPS33B-208ENST00000574755 MARCH5Q9NX47 278 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 SLC27A5Q9Y2P5 690 aa14.33□□□□□ -0.11
VPS33B-208ENST00000574755 A0A0G2JND7 137 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 MAGEB16A2A368 324 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 NT5C1B-RDH14C9J2C7 533 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 AP3B1O00203 1094 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 KLF11O14901 512 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 MATN3O15232 486 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 MYCP01106 439 aaPredicted RBP14.33□□□□□ -0.12
VPS33B-208ENST00000574755 FGFR3P22607 806 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 PBX3P40426 434 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 ARHGEF6Q15052 776 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 TIGD7Q6NT04 549 aaPredicted RBP14.33□□□□□ -0.12
VPS33B-208ENST00000574755 FUT10Q6P4F1 479 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 NLRP9Q7RTR0 991 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 TBC1D1Q86TI0 1168 aaPredicted RBP14.33□□□□□ -0.12
VPS33B-208ENST00000574755 TRIM42Q8IWZ5 723 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 RFWD2Q8NHY2 731 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 ZNF398Q8TD17 642 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 ACMSDQ8TDX5 336 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 SH3TC2Q8TF17 1288 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 ATP2A3Q93084 1043 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 SLC39A13Q96H72 371 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 C1orf74Q96LT6 269 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 CPNE1Q99829 537 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 CHRAC1Q9NRG0 131 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 KLC4Q9NSK0 619 aa14.33□□□□□ -0.12
VPS33B-208ENST00000574755 ZCWPW2A0A1B0GU75 182 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 FAM237BA0A1B0GVD1 139 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 CFAP73A6NFT4 308 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 C2CD2LO14523 706 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 PSMD3O43242 534 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 FKTNO75072 461 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 NEBLO76041 1014 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 MT-CYBP00156 380 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-208ENST00000574755 HNRNPH1P31943 449 aaKnown RBP14.32□□□□□ -0.12
VPS33B-208ENST00000574755 TMPRSS15P98073 1019 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 NRG1Q02297 640 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-208ENST00000574755 ARTNQ5T4W7 220 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 CYB5D1Q6P9G0 228 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 MIB1Q86YT6 1006 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 NUDCD3Q8IVD9 361 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 E2F7Q96AV8 911 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 KLHL29Q96CT2 875 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 ZNF419Q96HQ0 510 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-208ENST00000574755 IL12RB2Q99665 862 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 TMEM51Q9NW97 253 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 CCDC195A0A1B0GUA6 201 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 MTMR11A4FU01 709 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 CACNG3O60359 315 aa14.32□□□□□ -0.12
VPS33B-208ENST00000574755 ANXA9O76027 345 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms