RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 DUSP23Q9BVJ7 150 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 CALN1Q9BXU9 219 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 OSBPL2Q9H1P3 480 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 PREBQ9HCU5 417 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 KLHL11Q9NVR0 708 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 SLC25A13Q9UJS0 675 aa12.32□□□□□ -0.44
CTNS-208ENST00000574218 PTPN13Q12923 2485 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 PIK3R2O00459 728 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 MYL1P05976 194 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 EPB41P11171 864 aaKnown RBP12.31□□□□□ -0.44
CTNS-208ENST00000574218 AKT2P31751 481 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 DRD3P35462 400 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 RGS7P49802 495 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 STK19P49842 368 aaPredicted RBP12.31□□□□□ -0.44
CTNS-208ENST00000574218 CSRP3P50461 194 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 KCNMA1Q12791 1236 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 ADAM9Q13443 819 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 SLC12A1Q13621 1099 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 NFIL3Q16649 462 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 DCAF6Q58WW2 860 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 FSCBQ5H9T9 825 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 KIAA1614Q5VZ46 1190 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 NADSYN1Q6IA69 706 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 LGI2Q8N0V4 545 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 SLC25A45Q8N413 288 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 IFI44Q8TCB0 444 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 SEMA4DQ92854 862 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 APOLD1Q96LR9 279 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 PPP1R9BQ96SB3 815 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
CTNS-208ENST00000574218 DYRK4Q9NR20 520 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 NLGN3Q9NZ94 848 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 ARHGAP20Q9P2F6 1191 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 KIAA1257Q9ULG3 409 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 SATB2Q9UPW6 733 aa12.31□□□□□ -0.44
CTNS-208ENST00000574218 C10orf142B7Z368 130 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 F5H5T6 163 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 SLC31A1O15431 190 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 PIAS2O75928 621 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 FBXO21O94952 628 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 OXCT1P55809 520 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 CNTN1Q12860 1018 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 CUL2Q13617 745 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 ZSCAN23Q3MJ62 389 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 FOXD4L6Q3SYB3 417 aaPredicted RBP12.3□□□□□ -0.44
CTNS-208ENST00000574218 C6orf132Q5T0Z8 1188 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 TCERG1LQ5VWI1 586 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 FOXR1Q6PIV2 292 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 FOXD4L3Q6VB84 417 aaPredicted RBP12.3□□□□□ -0.44
CTNS-208ENST00000574218 APCDD1Q8J025 514 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 ARL14Q8N4G2 192 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 SNRNP27Q8WVK2 155 aaKnown RBP12.3□□□□□ -0.44
CTNS-208ENST00000574218 FAM149B1Q96BN6 582 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 GRAMD1AQ96CP6 724 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 TRIM62Q9BVG3 475 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 ASCL3Q9NQ33 180 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 UCKL1Q9NWZ5 548 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 NCKIPSDQ9NZQ3 722 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 SLC12A6Q9UHW9 1150 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 PCDHA7Q9UN72 937 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 TLR6Q9Y2C9 796 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 CA5BQ9Y2D0 317 aa12.3□□□□□ -0.44
CTNS-208ENST00000574218 RP1P56715 2156 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 H3BM21 787 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 K7ENP7 123 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 M0QYV0 167 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 O00370 1275 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 ALOX15BO15296 676 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 BNIP3LO60238 219 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 VAV1P15498 845 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 PDGFRAP16234 1089 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 TACR2P21452 398 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 TBXAS1P24557 533 aaPredicted RBP12.29□□□□□ -0.44
CTNS-208ENST00000574218 HNRNPKP61978 463 aaKnown RBP eCLIP12.29□□□□□ -0.444e-6■■■■□ 20.3
CTNS-208ENST00000574218 NFATC3Q12968 1075 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 NNTQ13423 1086 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 ISXQ2M1V0 245 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
CTNS-208ENST00000574218 AGBL4Q5VU57 503 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
CTNS-208ENST00000574218 RAP1GAP2Q684P5 730 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 INO80CQ6PI98 192 aaPredicted RBP12.29□□□□□ -0.44
CTNS-208ENST00000574218 IGF2-ASQ6U949 168 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 DQX1Q8TE96 717 aaKnown RBP12.29□□□□□ -0.44
CTNS-208ENST00000574218 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
CTNS-208ENST00000574218 KLK6Q92876 244 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 ERCC4Q92889 916 aaPredicted RBP12.29□□□□□ -0.44
CTNS-208ENST00000574218 FCRL2Q96LA5 508 aaPredicted RBP12.29□□□□□ -0.44
CTNS-208ENST00000574218 CCDC114Q96M63 670 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 ARHGAP9Q9BRR9 750 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 MIS12Q9H081 205 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 DNAJC28Q9NX36 388 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 USP25Q9UHP3 1055 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 MAPK8IP1Q9UQF2 711 aa12.29□□□□□ -0.44
CTNS-208ENST00000574218 A0A1W2PQU0 124 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 CPED1A4D0V7 1026 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
CTNS-208ENST00000574218 CETN3O15182 167 aa12.28□□□□□ -0.44
CTNS-208ENST00000574218 SART1O43290 800 aaKnown RBP12.28□□□□□ -0.44
CTNS-208ENST00000574218 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms