RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SYNCRIPO60506 623 aaKnown RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 APBB3O95704 486 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 KCNA4P22459 653 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 MZF1P28698 734 aaPredicted RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 EPHB2P29323 1055 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 HOXC13P31276 330 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 SLC1A1P43005 524 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 SSR1P43307 286 aaKnown RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 NOP2P46087 812 aaKnown RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 HCAR3P49019 387 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 HADHBP55084 474 aaKnown RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 TPI1P60174 286 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 ENPP2Q13822 863 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 MESDQ14696 234 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 STARD3Q14849 445 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 LPAL2Q16609 132 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 FNDC3BQ53EP0 1204 aaKnown RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 FAM72AQ5TYM5 149 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 FAM72DQ6L9T8 149 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 PRR23BQ6ZRT6 265 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 TFAP2DQ7Z6R9 452 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 WDR5BQ86VZ2 330 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 FAM72BQ86X60 149 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 APCDD1Q8J025 514 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 PYROXD2Q8N2H3 581 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 CCDC112Q8NEF3 446 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 TSTD1Q8NFU3 115 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 NELL1Q92832 810 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 FEM1AQ9BSK4 669 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 MUC3BQ9H195 1237 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 ZWILCHQ9H900 591 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 OSGEPQ9NPF4 335 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 EBF1Q9UH73 591 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 SLC25A13Q9UJS0 675 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 VPS28Q9UK41 221 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 INTS6Q9UL03 887 aaKnown RBP11.32□□□□□ -0.6
CHD3-216ENST00000573936 HCN2Q9UL51 889 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 ERVW-1Q9UQF0 538 aa11.32□□□□□ -0.6
CHD3-216ENST00000573936 BTNL10A8MVZ5 291 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 EEF2KO00418 725 aaKnown RBP11.31□□□□□ -0.6
CHD3-216ENST00000573936 LILRB5O75023 590 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 ADAM23O75077 832 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 KRT7P08729 469 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 TDGF1P13385 188 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 CNR2P34972 360 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 ARL4AP40617 200 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 IL12RB1P42701 662 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 WASP42768 502 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 IRAK1P51617 712 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 SPEM2Q0P670 501 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 SEMA3BQ13214 749 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 PPM1JQ5JR12 505 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 ARTNQ5T4W7 220 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 LAIR1Q6GTX8 287 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 SERPINA13PQ6UXR4 307 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 RAD9BQ6WBX8 426 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 NLRP14Q86W24 1093 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 LONP2Q86WA8 852 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 TMEM139Q8IV31 216 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 MAP7D3Q8IWC1 876 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 RTL3Q8N8U3 475 aaKnown RBP11.31□□□□□ -0.6
CHD3-216ENST00000573936 NETO1Q8TDF5 533 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 CYB5D2Q8WUJ1 264 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 SORCS1Q8WY21 1168 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 ALG14Q96F25 216 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 PEBP4Q96S96 227 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 KCTD15Q96SI1 283 aaPredicted RBP11.31□□□□□ -0.6
CHD3-216ENST00000573936 ACOX2Q99424 681 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 C2orf49Q9BVC5 232 aaPredicted RBP11.31□□□□□ -0.6
CHD3-216ENST00000573936 MAGEB5Q9BZ81 275 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 MAGEH1Q9H213 219 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 FBRSQ9HAH7 460 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 GPATCH2LQ9NWQ4 482 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 CACNA2D2Q9NY47 1150 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 OR51B4Q9Y5P0 310 aa11.31□□□□□ -0.6
CHD3-216ENST00000573936 CXorf51AA0A1B0GTR3 108 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.3□□□□□ -0.6
CHD3-216ENST00000573936 TCRBV21S2A2A0A5A6 115 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 TARSL2A2RTX5 802 aaKnown RBP11.3□□□□□ -0.6
CHD3-216ENST00000573936 ANTXRLA6NF34 631 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 H3BRJ5 948 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 RAMP2O60895 175 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 EPHX1P07099 455 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 ADRB1P08588 477 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 RARAP10276 462 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 IL1R2P27930 398 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 VAV2P52735 878 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 YBEYP58557 167 aaPredicted RBP11.3□□□□□ -0.6
CHD3-216ENST00000573936 SLC25A11Q02978 314 aaKnown RBP11.3□□□□□ -0.6
CHD3-216ENST00000573936 GNA12Q03113 381 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 SLC20A2Q08357 652 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 BYSLQ13895 437 aaKnown RBP11.3□□□□□ -0.6
CHD3-216ENST00000573936 KRT81Q14533 505 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 POLD3Q15054 466 aaPredicted RBP11.3□□□□□ -0.6
CHD3-216ENST00000573936 DPYSL2Q16555 572 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 PTPRNQ16849 979 aa11.3□□□□□ -0.6
CHD3-216ENST00000573936 PPP6R3Q5H9R7 873 aaPredicted RBP11.3□□□□□ -0.6
CHD3-216ENST00000573936 RETSATQ6NUM9 610 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms