RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PI4KAP42356 2102 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 ATXN2Q99700 1313 aaKnown RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 A0A1B0GVM2 712 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 TCAF2A6NFQ2 919 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 SLC30A4O14863 429 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 PAGE1O75459 146 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 CCDC175P0C221 793 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 CCDC172P0C7W6 258 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 PDGFRAP16234 1089 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 MMP8P22894 467 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 ITPKAP23677 461 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 CD6P30203 668 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 FLT3P36888 993 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 GGCXP38435 758 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 CXCR3P49682 368 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 TPMTP51580 245 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 COPAP53621 1224 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 OXCT1P55809 520 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 ETF1P62495 437 aaKnown RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 ECT2LQ008S8 904 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 CENPCQ03188 943 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 ZNF33AQ06730 810 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 ZNF177Q13360 481 aaPredicted RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 SLC12A1Q13621 1099 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 PLEKHG6Q3KR16 790 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 STPG1Q5TH74 334 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 OTUD1Q5VV17 481 aaPredicted RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 IL31Q6EBC2 164 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 PHLDB2Q86SQ0 1253 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 C14orf80Q86SX3 495 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 RGL4Q8IZJ4 473 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 APCDD1Q8J025 514 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 KIF18AQ8NI77 898 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 IGSF8Q969P0 613 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 NT5C3BQ969T7 300 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 HSPA12BQ96MM6 686 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 CFAP57Q96MR6 1250 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 C11orf70Q9BRQ4 267 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 EDEM2Q9BV94 578 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 NUSAP1Q9BXS6 441 aaKnown RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 FBRSQ9HAH7 460 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 PRSS16Q9NQE7 514 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 ITM2CQ9NQX7 267 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 RXFP3Q9NSD7 469 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 ZNHIT6Q9NWK9 470 aaKnown RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 ARHGEF38Q9NXL2 777 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 WSB2Q9NYS7 404 aaPredicted RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 ADAM22Q9P0K1 906 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 USP36Q9P275 1121 aaKnown RBP9.35□□□□□ -0.91
NDE1-207ENST00000573203 TMEM59LQ9UK28 342 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 ERVW-1Q9UQF0 538 aa9.35□□□□□ -0.91
NDE1-207ENST00000573203 NYNRINQ9P2P1 1898 aaKnown RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 DCDC2BA2VCK2 349 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 PATE3B3GLJ2 98 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 RNASEH1O60930 286 aaKnown RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 CLDN11O75508 207 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 DNTTP04053 509 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 CFIP05156 583 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 CALB1P05937 261 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 SRPRAP08240 638 aaKnown RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 UNGP13051 313 aaPredicted RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 FERP16591 822 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 OXTRP30559 389 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 RDXP35241 583 aaKnown RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 NNMTP40261 264 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 NUMBP49757 651 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 IRAK1P51617 712 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 LIMK1P53667 647 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 ATP11AP98196 1134 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 FOXK2Q01167 660 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 SULT2A1Q06520 285 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 CLEC16AQ2KHT3 1053 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 HNRNPA1L2Q32P51 320 aaKnown RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 TRIM61Q5EBN2 209 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 SYCP2LQ5T4T6 812 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 ZNF776Q68DI1 518 aaPredicted RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 TRNP1Q6NT89 227 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 WDR59Q6PJI9 974 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 LRRC31Q6UY01 552 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 ARCQ7LC44 396 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 FAM124AQ86V42 546 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 EMC1Q8N766 993 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 KDM1BQ8NB78 822 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 MYRIPQ8NFW9 859 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 CEP76Q8TAP6 659 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 CPLX3Q8WVH0 158 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 FOXJ1Q92949 421 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 TOE1Q96GM8 510 aaKnown RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 MYO19Q96H55 970 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 RPL10LQ96L21 214 aaKnown RBP9.34□□□□□ -0.91
NDE1-207ENST00000573203 MRGPRX3Q96LB0 322 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 PCDHB18PQ96TA0 734 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 AGPAT1Q99943 283 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 GPR174Q9BXC1 333 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 TMEM74BQ9NUR3 256 aa9.34□□□□□ -0.91
NDE1-207ENST00000573203 MYO1AQ9UBC5 1043 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms