RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PYCARD-AS1I3L0S3 204 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 FBXO21O94952 628 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 TACR2P21452 398 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 DGKAP23743 735 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 NNMTP40261 264 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 RHDQ02161 417 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 CNTN1Q12860 1018 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 SETMARQ53H47 684 aaPredicted RBP20.47■□□□□ 0.87
CCDC40-206ENST00000572083 HS1BP3Q53T59 392 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 TRIM69Q86WT6 500 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 FRS2Q8WU20 508 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 ZNF578Q96N58 590 aaPredicted RBP20.47■□□□□ 0.87
CCDC40-206ENST00000572083 KDM4CQ9H3R0 1056 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 TJP2Q9UDY2 1190 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 PCDHB4Q9Y5E5 795 aa20.47■□□□□ 0.87
CCDC40-206ENST00000572083 SLC7A4O43246 635 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 APOEP02649 317 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 PAEPP09466 180 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 TBXAS1P24557 533 aaPredicted RBP20.46■□□□□ 0.87
CCDC40-206ENST00000572083 NUDT1P36639 197 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 NUCB2P80303 420 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 LY6DQ14210 128 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 OR4C6Q8NH72 309 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 OR8D1Q8WZ84 308 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 KLHDC7BQ96G42 594 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 HSFY1Q96LI6 401 aa20.46■□□□□ 0.87
CCDC40-206ENST00000572083 A0A1B0GVM2 712 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 PRAMEF26H0Y7S4 382 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 RNF225M0QZC1 329 aaPredicted RBP20.45■□□□□ 0.86
CCDC40-206ENST00000572083 OPA1O60313 960 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 USP12O75317 370 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 THEGLP0DJG4 465 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 MYF5P13349 255 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 PRLRP16471 622 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 UCNP55089 124 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 CNGA2Q16280 664 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 ACCSLQ4AC99 568 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 ZC3H12AQ5D1E8 599 aaKnown RBP20.45■□□□□ 0.86
CCDC40-206ENST00000572083 CDCP2Q5VXM1 449 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 SYPL2Q5VXT5 272 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 DSG4Q86SJ6 1040 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 KCNE4Q8WWG9 221 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 KLK6Q92876 244 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 KAT5Q92993 513 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 DEPDC7Q96QD5 511 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 FZD3Q9NPG1 666 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 ST7Q9NRC1 585 aa20.45■□□□□ 0.86
CCDC40-206ENST00000572083 COL6A6A6NMZ7 2263 aa20.44■□□□□ 0.86
CCDC40-206ENST00000572083 F5H5T6 163 aa20.44■□□□□ 0.86
CCDC40-206ENST00000572083 SLC16A3O15427 465 aaKnown RBP20.44■□□□□ 0.86
CCDC40-206ENST00000572083 SLC31A1O15431 190 aa20.44■□□□□ 0.86
CCDC40-206ENST00000572083 CSO75390 466 aaKnown RBP20.44■□□□□ 0.86
CCDC40-206ENST00000572083 SULT2A1Q06520 285 aa20.44■□□□□ 0.86
CCDC40-206ENST00000572083 KCNMA1Q12791 1236 aa20.44■□□□□ 0.86
CCDC40-206ENST00000572083 FAM46CQ5VWP2 391 aa20.44■□□□□ 0.86
CCDC40-206ENST00000572083 KRBA2Q6ZNG9 492 aa20.44■□□□□ 0.86
CCDC40-206ENST00000572083 CCAR2Q8N163 923 aaKnown RBP20.44■□□□□ 0.86
CCDC40-206ENST00000572083 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.44■□□□□ 0.86
CCDC40-206ENST00000572083 CALN1Q9BXU9 219 aa20.44■□□□□ 0.86
CCDC40-206ENST00000572083 KLK10O43240 276 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 BNIP3LO60238 219 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
CCDC40-206ENST00000572083 CKMT1AP12532 417 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 TAS2R38P59533 333 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 SLC12A1Q13621 1099 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 STILQ15468 1287 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 Q6ZVU0 165 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 FAM181AQ8N9Y4 354 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 TMEM145Q8NBT3 493 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 SLC35C1Q96A29 364 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 BTN2A3PQ96KV6 586 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 SPATA32Q96LK8 384 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 OSBPL2Q9H1P3 480 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 PPM1HQ9ULR3 514 aa20.43■□□□□ 0.86
CCDC40-206ENST00000572083 C1QTNF3-AMACRE9PGA6 284 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 RNGTTO60942 597 aaKnown RBP20.42■□□□□ 0.86
CCDC40-206ENST00000572083 DXOO77932 396 aaKnown RBP20.42■□□□□ 0.86
CCDC40-206ENST00000572083 GIMD1P0DJR0 217 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 ZNF18P17022 549 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 PITX1P78337 314 aaPredicted RBP20.42■□□□□ 0.86
CCDC40-206ENST00000572083 CXorf57Q6NSI4 855 aaKnown RBP20.42■□□□□ 0.86
CCDC40-206ENST00000572083 LSMEM2Q8N112 164 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 PPM1KQ8N3J5 372 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 OR13H1Q8NG92 308 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 WBP1Q96G27 269 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 VCPIP1Q96JH7 1222 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 APOLD1Q96LR9 279 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 GOLPH3LQ9H4A5 285 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 POLR1BQ9H9Y6 1135 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 PREBQ9HCU5 417 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 ASCL3Q9NQ33 180 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 KLHL11Q9NVR0 708 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 SLC25A13Q9UJS0 675 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 HECTD1Q9ULT8 2610 aa20.42■□□□□ 0.86
CCDC40-206ENST00000572083 TDRD6O60522 2096 aaKnown RBP20.41■□□□□ 0.86
CCDC40-206ENST00000572083 LY6G6EA0A0G2JKS1 128 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 FAM237AA0A1B0GTK4 181 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 A0A1W2PQU0 124 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 TCAF2A6NFQ2 919 aa20.41■□□□□ 0.86
CCDC40-206ENST00000572083 SART1O43290 800 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms