RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 C9JVG2 144 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 TK2O00142 265 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 CBX4O00257 560 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 PRPF4O43172 522 aaKnown RBP eCLIP16.54■□□□□ 0.24
RAB40B-206ENST00000571995 MAP3K7O43318 606 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 GABBR2O75899 941 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 HNRNPLP14866 589 aaKnown RBP eCLIP16.54■□□□□ 0.24
RAB40B-206ENST00000571995 FDFT1P37268 417 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 GATMP50440 423 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 NUDT2P50583 147 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 CDC26Q8NHZ8 85 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 C10orf82Q8WW14 230 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 PFDN4Q9NQP4 134 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 SSC5DA1L4H1 1573 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 TCRBV5S1A1TA0A578 114 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 CLGNO14967 610 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 DCBLD1Q8N8Z6 715 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 MS4A4AQ96JQ5 239 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 PIF1Q9H611 641 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 PLK2Q9NYY3 685 aa16.54■□□□□ 0.24
RAB40B-206ENST00000571995 LAMA2P24043 3122 aaKnown RBP16.54■□□□□ 0.24
RAB40B-206ENST00000571995 XPO1O14980 1071 aaKnown RBP16.53■□□□□ 0.24
RAB40B-206ENST00000571995 TPST1O60507 370 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 NMBRP28336 390 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 SERPINB9P50453 376 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 POLE2P56282 527 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 MPP1Q00013 466 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 SEMG2Q02383 582 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 DEFB107AQ8IZN7 70 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 OR6K2Q8NGY2 324 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 VPS39Q96JC1 886 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 ADAMTS10Q9H324 1103 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 SNX15Q9NRS6 342 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 STOML1Q9UBI4 398 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 C15orf41Q9Y2V0 281 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 BRCA2P51587 3418 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 NEMP2A6NFY4 417 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 AOC2O75106 756 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 SUPT7LO94864 414 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 INCA1Q0VD86 236 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 SUGP1Q8IWZ8 645 aaKnown RBP16.53■□□□□ 0.24
RAB40B-206ENST00000571995 FBXO27Q8NI29 283 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 DLGAP2Q9P1A6 1054 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 PPME1Q9Y570 386 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 A0A1W2PQH9 124 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 ERI2A8K979 691 aaKnown RBP16.53■□□□□ 0.24
RAB40B-206ENST00000571995 PAGE1O75459 146 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 GFAPP14136 432 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 CCND3P30281 292 aaPredicted RBP16.53■□□□□ 0.24
RAB40B-206ENST00000571995 WEE1P30291 646 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 GP5P40197 560 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 CD86P42081 329 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 EMC10Q5UCC4 262 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 RNF180Q86T96 592 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 GALNT4Q8N4A0 578 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 C3orf58Q8NDZ4 430 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 DNAJC9Q8WXX5 260 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 SMOQ99835 787 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 BTBD10Q9BSF8 475 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 FTHL17Q9BXU8 183 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 OXCT2Q9BYC2 517 aaPredicted RBP16.53■□□□□ 0.24
RAB40B-206ENST00000571995 FRMD8P1Q9BZ68 369 aaPredicted RBP16.53■□□□□ 0.24
RAB40B-206ENST00000571995 GGA2Q9UJY4 613 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 PCDHA11Q9Y5I1 949 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 WASF2Q9Y6W5 498 aa16.53■□□□□ 0.24
RAB40B-206ENST00000571995 GPR32O75388 356 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 CCNB1P14635 433 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 OR1E1P30953 314 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 LDLRAD1Q5T700 205 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 ANKRD23Q86SG2 305 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 SPATA24Q86W54 205 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 PPHLN1Q8NEY8 458 aaKnown RBP16.52■□□□□ 0.24
RAB40B-206ENST00000571995 DQX1Q8TE96 717 aaKnown RBP16.52■□□□□ 0.24
RAB40B-206ENST00000571995 ABCG8Q9H221 673 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 IPO11Q9UI26 975 aaKnown RBP16.52■□□□□ 0.24
RAB40B-206ENST00000571995 SRRM3A6NNA2 597 aaPredicted RBP16.52■□□□□ 0.24
RAB40B-206ENST00000571995 TBKBP1A7MCY6 615 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 NVLO15381 856 aaKnown RBP16.52■□□□□ 0.24
RAB40B-206ENST00000571995 F2P00734 622 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 DUSP4Q13115 394 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 GRB14Q14449 540 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 SNX30Q5VWJ9 437 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 GSTCDQ8NEC7 633 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 MUC3BQ9H195 1237 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 FAM50BQ9Y247 325 aa16.52■□□□□ 0.24
RAB40B-206ENST00000571995 GLRA3O75311 464 aa16.52■□□□□ 0.23
RAB40B-206ENST00000571995 PDE1CQ14123 709 aaPredicted RBP16.52■□□□□ 0.23
RAB40B-206ENST00000571995 RALGPS1Q5JS13 557 aa16.52■□□□□ 0.23
RAB40B-206ENST00000571995 NAPEPLDQ6IQ20 393 aa16.52■□□□□ 0.23
RAB40B-206ENST00000571995 CCDC117Q8IWD4 279 aaPredicted RBP16.52■□□□□ 0.23
RAB40B-206ENST00000571995 RBM15BQ8NDT2 890 aaKnown RBP16.52■□□□□ 0.23
RAB40B-206ENST00000571995 SIGLEC10Q96LC7 697 aa16.52■□□□□ 0.23
RAB40B-206ENST00000571995 HCSTQ9UBK5 93 aa16.52■□□□□ 0.23
RAB40B-206ENST00000571995 EFR3BQ9Y2G0 817 aa16.52■□□□□ 0.23
RAB40B-206ENST00000571995 PTGESO14684 152 aa16.51■□□□□ 0.23
RAB40B-206ENST00000571995 AMHP03971 560 aa16.51■□□□□ 0.23
RAB40B-206ENST00000571995 ALADP13716 330 aa16.51■□□□□ 0.23
RAB40B-206ENST00000571995 PGAM1P18669 254 aa16.51■□□□□ 0.23
RAB40B-206ENST00000571995 PTDSS1P48651 473 aaKnown RBP16.51■□□□□ 0.23
RAB40B-206ENST00000571995 NR2C2P49116 596 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms