RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 FSCBQ5H9T9 825 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 MS4A13Q5J8X5 152 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 ATG14Q6ZNE5 492 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 MMS22LQ6ZRQ5 1243 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 FAM186BQ8IYM0 893 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 CEP57L1Q8IYX8 460 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 TMEM145Q8NBT3 493 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 IRGQQ8WZA9 623 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 MMRN2Q9H8L6 949 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 FAM13BQ9NYF5 915 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
CHMP6-202ENST00000571457 TRAF3IP3Q9Y228 551 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 DOCK9Q9BZ29 2069 aa11.7□□□□□ -0.54
CHMP6-202ENST00000571457 C1QTNF3-AMACRE9PGA6 284 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 STX10O60499 249 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 YEATS4O95619 227 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 SFTPCP11686 197 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 LCP1P13796 627 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 CD19P15391 556 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 RPL13P26373 211 aaKnown RBP11.69□□□□□ -0.54
CHMP6-202ENST00000571457 AKT2P31751 481 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 STK19P49842 368 aaPredicted RBP11.69□□□□□ -0.54
CHMP6-202ENST00000571457 INHBCP55103 352 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 HNRNPKP61978 463 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHMP6-202ENST00000571457 YWHAEP62258 255 aaKnown RBP11.69□□□□□ -0.54
CHMP6-202ENST00000571457 NUCB2P80303 420 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 CNTN1Q12860 1018 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 NNTQ13423 1086 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 POM121L1PQ3SYA9 428 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 DCAF6Q58WW2 860 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 COLEC12Q5KU26 742 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 AGBL4Q5VU57 503 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 NADSYN1Q6IA69 706 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 NEK5Q6P3R8 708 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 ZNF574Q6ZN55 896 aaPredicted RBP11.69□□□□□ -0.54
CHMP6-202ENST00000571457 DCP2Q8IU60 420 aaKnown RBP11.69□□□□□ -0.54
CHMP6-202ENST00000571457 CFAP52Q8N1V2 620 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 FBXL13Q8NEE6 735 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 IFI44Q8TCB0 444 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 SERPINB11Q96P15 392 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 CCNL2Q96S94 520 aaPredicted RBP11.69□□□□□ -0.54
CHMP6-202ENST00000571457 PPP1R9BQ96SB3 815 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 ARHGAP9Q9BRR9 750 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHMP6-202ENST00000571457 CALN1Q9BXU9 219 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 TRIM4Q9C037 500 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 KIAA1257Q9ULG3 409 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 MTMR6Q9Y217 621 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 TLR6Q9Y2C9 796 aa11.69□□□□□ -0.54
CHMP6-202ENST00000571457 SPTBN1Q01082 2364 aaKnown RBP11.69□□□□□ -0.54
CHMP6-202ENST00000571457 NYNRINQ9P2P1 1898 aaKnown RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 CDRT15L2A8MXV6 281 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 K7ESM1 405 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 TERTO14746 1132 aaKnown RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 ALOX15BO15296 676 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 SLC31A1O15431 190 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 KLRC4O43908 158 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 TCEA3O75764 348 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 LTFP02788 710 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 GIMD1P0DJR0 217 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 KRT10P13645 584 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 ZNF18P17022 549 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 PSMC2P35998 433 aaKnown RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 MXI1P50539 228 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 OXCT1P55809 520 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 NFIL3Q16649 462 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 ZCCHC8Q6NZY4 707 aaKnown RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 RBM44Q6ZP01 1051 aaKnown RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 APCDD1Q8J025 514 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 WDR36Q8NI36 951 aaKnown RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 UBA3Q8TBC4 463 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 FRS2Q8WU20 508 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 ATXN7L3BQ96GX2 97 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 FCRL2Q96LA5 508 aaPredicted RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 NUCKS1Q9H1E3 243 aaKnown RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 RAB20Q9NX57 234 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 ATXN7L1Q9ULK2 861 aaPredicted RBP11.68□□□□□ -0.54
CHMP6-202ENST00000571457 PPM1HQ9ULR3 514 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 CA5BQ9Y2D0 317 aa11.68□□□□□ -0.54
CHMP6-202ENST00000571457 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.67□□□□□ -0.54
CHMP6-202ENST00000571457 LY6G6EA0A0G2JKS1 128 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 CPED1A4D0V7 1026 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 FBXO21O94952 628 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 GJB6O95452 261 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 APOEP02649 317 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 ITGB2P05107 769 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 VDRP11473 427 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 VAV1P15498 845 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 PRLRP16471 622 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 HNRNPA2B1P22626 353 aaKnown RBP11.67□□□□□ -0.54
CHMP6-202ENST00000571457 METAP1P53582 386 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 CLN3Q13286 438 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 ZNF177Q13360 481 aaPredicted RBP11.67□□□□□ -0.54
CHMP6-202ENST00000571457 ACCSLQ4AC99 568 aa11.67□□□□□ -0.54
CHMP6-202ENST00000571457 USP53Q70EK8 1073 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms