RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 MAP3K13O43283 966 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 SNAP91O60641 907 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 SIN3BO75182 1162 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 LRIG2O94898 1065 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 RHOCP08134 193 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 FAM228BP0C875 321 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 VAV1P15498 845 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 DHPSP49366 369 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-207ENST00000570883 RPS14P62263 151 aaKnown RBP13.77□□□□□ -0.21
RPAIN-207ENST00000570883 RPL6Q02878 288 aaKnown RBP13.77□□□□□ -0.21
RPAIN-207ENST00000570883 CREB5Q02930 508 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 SULT2A1Q06520 285 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 SF3A2Q15428 464 aaKnown RBP13.77□□□□□ -0.21
RPAIN-207ENST00000570883 ARL13BQ3SXY8 428 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 TCEAL6Q6IPX3 200 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 PRR23CQ6ZRP0 262 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 SETD3Q86TU7 594 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-207ENST00000570883 NLRP14Q86W24 1093 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 SLC41A1Q8IVJ1 513 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 DEFB119Q8N690 84 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 ARFGAP1Q8N6T3 406 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 OR7D4Q8NG98 312 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 FRS2Q8WU20 508 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 TCEAL3Q969E4 200 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 ZYG11BQ9C0D3 744 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 MUC3BQ9H195 1237 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 RSPH9Q9H1X1 276 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-207ENST00000570883 FBRSQ9HAH7 460 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 ITM2CQ9NQX7 267 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 NDFIP2Q9NV92 336 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 SUN2Q9UH99 717 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.77□□□□□ -0.211e-9■□□□□ 9.3
RPAIN-207ENST00000570883 EDDM13A0A1B0GTR0 161 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 ZNF806P0C7X5 589 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 PSMA2P25787 234 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 CD6P30203 668 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 OR1E1P30953 314 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-207ENST00000570883 C6orf118Q5T5N4 469 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 SCYL2Q6P3W7 929 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 SLC36A4Q6YBV0 504 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 CYP4V2Q6ZWL3 525 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-207ENST00000570883 CYP2U1Q7Z449 544 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 SLFN11Q7Z7L1 901 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 DRC7Q8IY82 874 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 GPR161Q8N6U8 529 aaKnown RBP13.76□□□□□ -0.21
RPAIN-207ENST00000570883 PTPRN2Q92932 1015 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 TOE1Q96GM8 510 aaKnown RBP13.76□□□□□ -0.21
RPAIN-207ENST00000570883 PEBP4Q96S96 227 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.76□□□□□ -0.21
RPAIN-207ENST00000570883 RXFP3Q9NSD7 469 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 WSB2Q9NYS7 404 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-207ENST00000570883 MYO1AQ9UBC5 1043 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 VPS51Q9UID3 782 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 FZD10Q9ULW2 581 aa13.76□□□□□ -0.21
RPAIN-207ENST00000570883 ATXN2Q99700 1313 aaKnown RBP13.75□□□□□ -0.21
RPAIN-207ENST00000570883 ANKRD36A6QL64 1941 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 ILVBLA1L0T0 632 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 PATE3B3GLJ2 98 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 ATP9BO43861 1147 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 MT-CO1P00395 513 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 MYBL1P10243 752 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 GLDCP23378 1020 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 ITPKAP23677 461 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 SEMA3BQ13214 749 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 TRIM14Q14142 442 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 EFHC2Q5JST6 749 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 SPDYCQ5MJ68 293 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 LYSMD4Q5XG99 296 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 ZNF776Q68DI1 518 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-207ENST00000570883 RWDD4Q6NW29 188 aaKnown RBP13.75□□□□□ -0.21
RPAIN-207ENST00000570883 SARM1Q6SZW1 724 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 VPS36Q86VN1 386 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 STK40Q8N2I9 435 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 DCAF4L2Q8NA75 395 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 FNIP1Q8TF40 1166 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 RMDN1Q96DB5 314 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 TBC1D31Q96DN5 1066 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 TRIM11Q96F44 468 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 HSPA12BQ96MM6 686 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 FAM129BQ96TA1 746 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 THAP2Q9H0W7 228 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 TMEM74BQ9NUR3 256 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 GPATCH2LQ9NWQ4 482 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 SLC25A13Q9UJS0 675 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 HS3ST2Q9Y278 367 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 SCINQ9Y6U3 715 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 TMEM131Q92545 1883 aa13.75□□□□□ -0.21
RPAIN-207ENST00000570883 SHROOM3Q8TF72 1996 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 TARSL2A2RTX5 802 aaKnown RBP13.74□□□□□ -0.21
RPAIN-207ENST00000570883 K7ERQ8 282 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 GDF9O60383 454 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 MFAP3LO75121 409 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 ZMPSTE24O75844 475 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 ACADMP11310 421 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 SRCP12931 536 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 RHOQP17081 205 aa13.74□□□□□ -0.21
RPAIN-207ENST00000570883 L1CAMP32004 1257 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms