RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ZNF713Q8N859 430 aaPredicted RBP3.44□□□□□ -1.86
CNOT1-221ENST00000569924 TMIEQ8NEW7 156 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 OR5M3Q8NGP4 307 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 NFKBIDQ8NI38 313 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 SLC35B2Q8TB61 432 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 TBC1D5Q92609 795 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 SLC7A6OSQ96CW6 309 aaPredicted RBP3.44□□□□□ -1.86
CNOT1-221ENST00000569924 FAM120BQ96EK7 910 aaKnown RBP3.44□□□□□ -1.86
CNOT1-221ENST00000569924 KTI12Q96EK9 354 aaPredicted RBP3.44□□□□□ -1.86
CNOT1-221ENST00000569924 CNDP2Q96KP4 475 aaKnown RBP3.44□□□□□ -1.86
CNOT1-221ENST00000569924 CCDC17Q96LX7 622 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 ZSWIM3Q96MP5 696 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 SYT3Q9BQG1 590 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 RNF32Q9H0A6 362 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 ENKD1Q9H0I2 346 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 VCPKMTQ9H867 229 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 UNKLQ9H9P5 680 aaKnown RBP3.44□□□□□ -1.86
CNOT1-221ENST00000569924 ERVK-5Q9HDB9 667 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 FSCN3Q9NQT6 498 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 ATP8A2Q9NTI2 1148 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 TMLHEQ9NVH6 421 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 TAS2R10Q9NYW0 307 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 CROTQ9UKG9 612 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 ZNF215Q9UL58 517 aaPredicted RBP3.44□□□□□ -1.86
CNOT1-221ENST00000569924 PCDHGB4Q9UN71 923 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 CAMK2AQ9UQM7 478 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 ZNF711Q9Y462 761 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 RBM8AQ9Y5S9 174 aaKnown RBP3.44□□□□□ -1.86
CNOT1-221ENST00000569924 LYVE1Q9Y5Y7 322 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 CDY1Q9Y6F8 540 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 MYH8P13535 1937 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 ATRXP46100 2492 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 ZNF532Q9HCE3 1301 aa3.44□□□□□ -1.86
CNOT1-221ENST00000569924 PLXNA1Q9UIW2 1896 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 COL11A1P12107 1806 aaPredicted RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 PTGES3LE9PB15 166 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 E9PLN8 166 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 VWA5AO00534 786 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TSPAN4O14817 238 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 DCLK1O15075 740 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 VILLO15195 856 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ADAM23O75077 832 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ADAMTS4O75173 837 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 DUSP11O75319 330 aaKnown RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TULP3O75386 442 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ERAL1O75616 437 aaKnown RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 RPP40O75818 363 aaKnown RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 BEST1O76090 585 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 MTA2O94776 668 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 AGFG2O95081 481 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 RASAL1O95294 804 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 PGM3O95394 542 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 PGK1P00558 417 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TIMP1P01033 207 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 POMCP01189 267 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 PRNPP04156 253 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 PGK2P07205 417 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 CYP21A2P08686 494 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 CYP2D6P10635 497 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TAL1P17542 331 aaPredicted RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ITGB8P26012 769 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 EPHA8P29322 1005 aaPredicted RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 MRE11P49959 708 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ACLYP53396 1101 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 EPHB4P54760 987 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 NLRP5P59047 1200 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 RPS3AP61247 264 aaKnown RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ADAM17P78536 824 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SATB1Q01826 763 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SF3A3Q12874 501 aaKnown RBP eCLIP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 EPS8Q12929 822 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 PTP4A2Q12974 167 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 PPIGQ13427 754 aaKnown RBP eCLIP3.43□□□□□ -1.861e-6■■■□□ 16.1
CNOT1-221ENST00000569924 CSHL1Q14406 222 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 UBXN2BQ14CS0 331 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 NFIL3Q16649 462 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TBRG1Q3YBR2 411 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 DUSP28Q4G0W2 176 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ZNF484Q5JVG2 852 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 AKNAD1Q5T1N1 836 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 C12orf60Q5U649 245 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 CACHD1Q5VU97 1274 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 LIPMQ5VYY2 423 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 KRT40Q6A162 431 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 MCTP2Q6DN12 878 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 CEP85Q6P2H3 762 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 MAMDC4Q6UXC1 1216 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ZNF574Q6ZN55 896 aaPredicted RBP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 LARP4Q71RC2 724 aaKnown RBP eCLIP3.43□□□□□ -1.86
CNOT1-221ENST00000569924 KDELC2Q7Z4H8 507 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 TRABD2AQ86V40 505 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ZNF280BQ86YH2 543 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ITPRIPQ8IWB1 547 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 CMTM4Q8IZR5 234 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 LCORLQ8N3X6 602 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SLC44A5Q8NCS7 719 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 KLHDC9Q8NEP7 349 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 SMARCC2Q8TAQ2 1214 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ETNPPLQ8TBG4 499 aa3.43□□□□□ -1.86
CNOT1-221ENST00000569924 ZCCHC10Q8TBK6 192 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms