RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 ADIGQ0VDE8 80 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 HNRNPA1L2Q32P51 320 aaKnown RBP10.47□□□□□ -0.73
RPAP1-212ENST00000569829 FAM133BQ5BKY9 247 aaKnown RBP10.47□□□□□ -0.73
RPAP1-212ENST00000569829 CT47A1Q5JQC4 288 aaPredicted RBP10.47□□□□□ -0.73
RPAP1-212ENST00000569829 MSANTD2Q6P1R3 559 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 USP30Q70CQ3 517 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 BEND5Q7L4P6 421 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 CFAP52Q8N1V2 620 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 STK40Q8N2I9 435 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 ZNF248Q8NDW4 579 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 OR2T34Q8NGX1 318 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 ZNF606Q8WXB4 792 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 RFFLQ8WZ73 363 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 AZIN2Q96A70 460 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 RPL10LQ96L21 214 aaKnown RBP10.47□□□□□ -0.73
RPAP1-212ENST00000569829 PRICKLE1Q96MT3 831 aaPredicted RBP10.47□□□□□ -0.73
RPAP1-212ENST00000569829 OMDQ99983 421 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 IRX2Q9BZI1 471 aaPredicted RBP10.47□□□□□ -0.73
RPAP1-212ENST00000569829 SUN2Q9UH99 717 aa10.47□□□□□ -0.73
RPAP1-212ENST00000569829 SPENQ96T58 3664 aaKnown RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3DA0A087WVF3 549 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3IA0A087WXS9 549 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3EA0A087X179 549 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3KA0A087X1G2 549 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3FA6NER0 549 aaPredicted RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 LRRC72A6NJI9 287 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3LB9A6J9 549 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 RTN2O75298 545 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 USP12O75317 370 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 FBXO21O94952 628 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 WISP1O95388 367 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 IGLV3-27P01718 113 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 FYNP06241 537 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 ATP5BP06576 529 aaKnown RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3HP0C7X1 549 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 GIMD1P0DJR0 217 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 C6P13671 934 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 ACP1P24666 158 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 BRD2P25440 801 aaKnown RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 ERCC5P28715 1186 aaPredicted RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 DRD3P35462 400 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 RXRGP48443 463 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 ARRB1P49407 418 aaPredicted RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 HARS2P49590 506 aaKnown RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 STK19P49842 368 aaPredicted RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 PCBP4P57723 403 aaKnown RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 ZNF445P59923 1031 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 RPS24P62847 133 aaKnown RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 MPP7Q5T2T1 576 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 ADGRF1Q5T601 910 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 PIK3R6Q5UE93 754 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3GQ6DHY5 549 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3CQ6IPX1 549 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TRIM65Q6PJ69 517 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TMEM110Q86TL2 294 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 TBC1D3Q8IZP1 549 aaPredicted RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 APCDD1Q8J025 514 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 SIX6OS1Q8N1H7 587 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 CARNMT1Q8N4J0 409 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 CLEC4CQ8WTT0 213 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 RNF139Q8WU17 664 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 KLK6Q92876 244 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 SLC4A5Q9BY07 1137 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 INTS2Q9H0H0 1204 aaKnown RBP10.46□□□□□ -0.73
RPAP1-212ENST00000569829 CLSTN2Q9H4D0 955 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 THAP9Q9H5L6 903 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 SARDHQ9UL12 918 aa10.46□□□□□ -0.73
RPAP1-212ENST00000569829 NYNRINQ9P2P1 1898 aaKnown RBP10.45□□□□□ -0.74
RPAP1-212ENST00000569829 A0A1B0GVM2 712 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 CALCAP01258 141 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 LTFP02788 710 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 LCP1P13796 627 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 SLC9A1P19634 815 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 PON1P27169 355 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 ACADSBP45954 432 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 TMPRSS3P57727 454 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 DAB2P98082 770 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 RHDQ02161 417 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.74
RPAP1-212ENST00000569829 EIF4EBP2Q13542 120 aaPredicted RBP10.45□□□□□ -0.74
RPAP1-212ENST00000569829 E2F5Q15329 346 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 EXOC3L4Q17RC7 722 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 ZNF542PQ5EBM4 170 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 CDCP2Q5VXM1 449 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 DPY19L2P1Q6NXN4 242 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 GBP6Q6ZN66 633 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 PRICKLE2Q7Z3G6 844 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 MFN1Q8IWA4 741 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 UNC45BQ8IWX7 931 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 KCNE4Q8WWG9 221 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 GOLGA1Q92805 767 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 PTPRN2Q92932 1015 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 TTC17Q96AE7 1141 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 VCPIP1Q96JH7 1222 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 NUCKS1Q9H1E3 243 aaKnown RBP10.45□□□□□ -0.74
RPAP1-212ENST00000569829 FBRSQ9HAH7 460 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 ASCL3Q9NQ33 180 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 LMBRD1Q9NUN5 540 aa10.45□□□□□ -0.74
RPAP1-212ENST00000569829 APEX2Q9UBZ4 518 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms