RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 KLHL10Q6JEL2 608 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 CXorf57Q6NSI4 855 aaKnown RBP12.44□□□□□ -0.42
CAPN3-220ENST00000569827 ZNF557Q8N988 423 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-220ENST00000569827 FRS2Q8WU20 508 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 HSFY1Q96LI6 401 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 FAM204AQ9H8W3 233 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 UCKL1Q9NWZ5 548 aa12.44□□□□□ -0.42
CAPN3-220ENST00000569827 CHD5Q8TDI0 1954 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 SLC31A1O15431 190 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 LATO43561 262 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 GRAP2O75791 330 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 LETM1O95202 739 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-220ENST00000569827 GLDCP23378 1020 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 CXADRP78310 365 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 ELAVL3Q14576 367 aaKnown RBP12.43□□□□□ -0.42
CAPN3-220ENST00000569827 SLC45A4Q5BKX6 768 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 GJB7Q6PEY0 223 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 TMC6Q7Z403 805 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 PRPF39Q86UA1 669 aaKnown RBP12.43□□□□□ -0.42
CAPN3-220ENST00000569827 FMR1NBQ8N0W7 255 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-220ENST00000569827 PRMT1Q99873 361 aaKnown RBP12.43□□□□□ -0.42
CAPN3-220ENST00000569827 RMND1Q9NWS8 449 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 CLCA2Q9UQC9 943 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 SNX10Q9Y5X0 201 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 ANKRD36A6QL64 1941 aa12.43□□□□□ -0.42
CAPN3-220ENST00000569827 MYO18BQ8IUG5 2567 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 E9PAM4 449 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 PYCARD-AS1I3L0S3 204 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 ATXN7O15265 892 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 THAP12O43422 761 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 PLRG1O43660 514 aaKnown RBP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 IGLV3-25P01717 112 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 CKMT2P17540 419 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 RXRGP48443 463 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 STX17P56962 302 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 TAS2R38P59533 333 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 APBA1Q02410 837 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 LRRC63Q05C16 580 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 C19orf57Q0VDD7 668 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 SFSWAPQ12872 951 aaKnown RBP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 NNTQ13423 1086 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 RTP5Q14D33 572 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 STILQ15468 1287 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 PROX2Q3B8N5 592 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 ZNF542PQ5EBM4 170 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 PCSK4Q6UW60 755 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 C14orf80Q86SX3 495 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 ERICH1Q86X53 443 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 PASD1Q8IV76 773 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 SPACA3Q8IXA5 215 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 SLC25A45Q8N413 288 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 MFSD2AQ8NA29 543 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 KDM1BQ8NB78 822 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 SNIP1Q8TAD8 396 aaKnown RBP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 OR8D1Q8WZ84 308 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 SMARCE1Q969G3 411 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 BTN2A3PQ96KV6 586 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 RPRD1AQ96P16 312 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 NOX5Q96PH1 765 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 SPAG5Q96R06 1193 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 GTPBP4Q9BZE4 634 aaKnown RBP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 IRX2Q9BZI1 471 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 SCAND2PQ9GZW5 306 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 METTL14Q9HCE5 456 aaKnown RBP12.42□□□□□ -0.42
CAPN3-220ENST00000569827 VANGL2Q9ULK5 521 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 CTNND2Q9UQB3 1225 aa12.42□□□□□ -0.42
CAPN3-220ENST00000569827 KCNU1A8MYU2 1149 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 K7ERQ8 282 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 YKT6O15498 198 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 RRP8O43159 456 aaKnown RBP12.41□□□□□ -0.42
CAPN3-220ENST00000569827 SNAP91O60641 907 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 RNGTTO60942 597 aaKnown RBP12.41□□□□□ -0.42
CAPN3-220ENST00000569827 MT-CO1P00395 513 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 MPOP05164 745 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 CTSLP07711 333 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 C1SP09871 688 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 KRT10P13645 584 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 ZNF18P17022 549 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 NNMTP40261 264 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 RPL34P49207 117 aaKnown RBP12.41□□□□□ -0.42
CAPN3-220ENST00000569827 CLDN2P57739 230 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 DAB2P98082 770 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 TLE3Q04726 772 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 STAT4Q14765 748 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 DLG2Q15700 870 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 FBXL22Q6P050 247 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 DEFB106AQ8N104 65 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 ZNF843Q8N446 348 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 ATP6V0D2Q8N8Y2 350 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 BAP1Q92560 729 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 RNF34Q969K3 372 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 ALG14Q96F25 216 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 CALN1Q9BXU9 219 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 NRSN2Q9GZP1 204 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 INTS2Q9H0H0 1204 aaKnown RBP12.41□□□□□ -0.42
CAPN3-220ENST00000569827 ERVMER34-1Q9H9K5 563 aa12.41□□□□□ -0.42
CAPN3-220ENST00000569827 POPDC2Q9HBU9 364 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms