RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 MUC22E2RYF6 1773 aaPredicted RBP13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 A0A0A0MRY4 1105 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 WASH4PA8MWX3 477 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 EEF2KO00418 725 aaKnown RBP13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 KAT7O95251 611 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 APODP05090 189 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 GOT1P17174 413 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 TGM1P22735 817 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 EPHB2P29323 1055 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 HLA-FP30511 346 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 ID4P47928 161 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 MARCKSL1P49006 195 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 HCAR3P49019 387 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 CDH6P55285 790 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 TPI1P60174 286 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 KDSRQ06136 332 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 DPYSQ14117 519 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 FSCBQ5H9T9 825 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 GRAMD4Q6IC98 578 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 RWDD4Q6NW29 188 aaKnown RBP13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 MFN1Q8IWA4 741 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 SYCE1Q8N0S2 351 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 CARNMT1Q8N4J0 409 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZNF557Q8N988 423 aaPredicted RBP13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 TERB1Q8NA31 727 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 OR52K2Q8NGK3 314 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 GAB3Q8WWW8 586 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 CSPG4P5Q96PW8 444 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 ARHGEF4Q9NR80 690 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 KLHL11Q9NVR0 708 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 RCOR3Q9P2K3 495 aaPredicted RBP13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 TBC1D30Q9Y2I9 924 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 GON4LQ3T8J9 2241 aa13.22□□□□□ -0.29
CNEP1R1-211ENST00000569647 SPTBN2O15020 2390 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 C3orf70A6NLC5 250 aaPredicted RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 USP27XA6NNY8 438 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZNF487B1APH4 448 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 H0Y626 953 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 H3BRJ5 948 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 FGF10O15520 208 aaPredicted RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 RPP40O75818 363 aaKnown RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 APBB3O95704 486 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 FTCDO95954 541 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 CD48P09326 243 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 IL4RP24394 825 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 CTNNA2P26232 953 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 CD70P32970 193 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 CTNNA1P35221 906 aaKnown RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 GRIA2P42262 883 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 MRPS21P82921 87 aaKnown RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 LMAN2Q12907 356 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZNF177Q13360 481 aaPredicted RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 CDH18Q13634 790 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 DPYSL3Q14195 570 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 PDK2Q15119 407 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 GEN1Q17RS7 908 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 RFX8Q6ZV50 586 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 CEP68Q76N32 757 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 TFAP2DQ7Z6R9 452 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 SETD3Q86TU7 594 aaPredicted RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 VSIG1Q86XK7 387 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 FAM160A2Q8N612 972 aaPredicted RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 GPR161Q8N6U8 529 aaKnown RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 RTL3Q8N8U3 475 aaKnown RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 RAPGEF5Q92565 580 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 KRT35Q92764 455 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 FAF2Q96CS3 445 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 RMDN1Q96DB5 314 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 ZNF670Q9BS34 389 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 PARD6AQ9NPB6 346 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 ABCB8Q9NUT2 735 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 NDFIP2Q9NV92 336 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 DDX56Q9NY93 547 aaKnown RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 EBF1Q9UH73 591 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 AMFRQ9UKV5 643 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 INTS6Q9UL03 887 aaKnown RBP13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 MMP17Q9ULZ9 603 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 PCDHA3Q9Y5H8 950 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 OR51B4Q9Y5P0 310 aa13.21□□□□□ -0.29
CNEP1R1-211ENST00000569647 PI4KAP42356 2102 aa13.21□□□□□ -0.3
CNEP1R1-211ENST00000569647 CCDC66A2RUB6 948 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 PRRT4C9JH25 899 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 DCLK1O15075 740 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 AXIN1O15169 862 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 KRT1P04264 644 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 RETP07949 1114 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 PABPC1P11940 636 aaKnown RBP13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 TNNT1P13805 278 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 ERCC2P18074 760 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 KDELR1P24390 212 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 OR1E1P30953 314 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 TIE1P35590 1138 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 ARL4AP40617 200 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 TNFRSF4P43489 277 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 KIR2DL1P43626 348 aaPredicted RBP13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 MAPKAPK2P49137 400 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 PEX5P50542 639 aa13.2□□□□□ -0.3
CNEP1R1-211ENST00000569647 SPEM2Q0P670 501 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms