RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ALADP13716 330 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 DNA2P51530 1060 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 GALK1P51570 392 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 LMAN2Q12907 356 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 KLF1Q13351 362 aaPredicted RBP24.03■■□□□ 1.44
RAB40C-212ENST00000569575 XRCC4Q13426 336 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 PDK1Q15118 436 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 FSCBQ5H9T9 825 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 CCDC181Q5TID7 509 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 RNF219Q5W0B1 726 aaPredicted RBP24.03■■□□□ 1.44
RAB40C-212ENST00000569575 CIR1Q86X95 450 aaPredicted RBP24.03■■□□□ 1.44
RAB40C-212ENST00000569575 PHTF2Q8N3S3 785 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 SYNPOQ8N3V7 929 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 KIF18AQ8NI77 898 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 CASKIN2Q8WXE0 1202 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 FAM3CQ92520 227 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 ALG14Q96F25 216 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 P2RY11Q96G91 374 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 TSGA13Q96PP4 275 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 VPS28Q9UK41 221 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 OR51B4Q9Y5P0 310 aa24.03■■□□□ 1.44
RAB40C-212ENST00000569575 C5orf42Q9H799 3197 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 RASA4BC9J798 803 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 RASA4O43374 803 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 CEP104O60308 925 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 KRT10P13645 584 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 POLR2EP19388 210 aaKnown RBP24.02■■□□□ 1.44
RAB40C-212ENST00000569575 ZXDAP98168 799 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 ZNF211Q13398 564 aaPredicted RBP24.02■■□□□ 1.44
RAB40C-212ENST00000569575 KAZNQ674X7 775 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 RETSATQ6NUM9 610 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 CHFRQ96EP1 664 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 FERMT1Q9BQL6 677 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 OSBPL6Q9BZF3 934 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 CLEC4EQ9ULY5 219 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 F5P12259 2224 aa24.02■■□□□ 1.44
RAB40C-212ENST00000569575 TBC1D3BA6NDS4 549 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 HACD1B0YJ81 288 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 PPP1R12AO14974 1030 aaPredicted RBP24.01■■□□□ 1.43
RAB40C-212ENST00000569575 KDELR3O43731 214 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 SRPRAP08240 638 aaKnown RBP24.01■■□□□ 1.43
RAB40C-212ENST00000569575 CSKP41240 450 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 SLC6A11P48066 632 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 GALNT2Q10471 571 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 SERINC3Q13530 473 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 HSF5Q4G112 596 aaPredicted RBP24.01■■□□□ 1.43
RAB40C-212ENST00000569575 PITRM1Q5JRX3 1037 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 DGKKQ5KSL6 1271 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 TIGD7Q6NT04 549 aaPredicted RBP24.01■■□□□ 1.43
RAB40C-212ENST00000569575 TPRG1Q6ZUI0 275 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 C12orf40Q86WS4 652 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 TTC8Q8TAM2 541 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 HAUS1Q96CS2 278 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 ZNF599Q96NL3 588 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 HEMGNQ9BXL5 484 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 SLC39A8Q9C0K1 460 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 NOL6Q9H6R4 1146 aaKnown RBP24.01■■□□□ 1.43
RAB40C-212ENST00000569575 ATP13A1Q9HD20 1204 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 CD320Q9NPF0 282 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 NDFIP2Q9NV92 336 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 ETNK2Q9NVF9 386 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 HAUS2Q9NVX0 235 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 DTLQ9NZJ0 730 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 MUTYHQ9UIF7 546 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 NUP205Q92621 2012 aa24.01■■□□□ 1.43
RAB40C-212ENST00000569575 SPTBN5Q9NRC6 3674 aaKnown RBP24■■□□□ 1.43
RAB40C-212ENST00000569575 PGRMC1O00264 195 aaKnown RBP24■■□□□ 1.43
RAB40C-212ENST00000569575 MTSS1O43312 755 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 FGGP02679 453 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 CCNCP24863 283 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 CD70P32970 193 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 NNMTP40261 264 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 SIGLEC14Q08ET2 396 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 IL31Q6EBC2 164 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 ADIPOR2Q86V24 386 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 ARHGAP12Q8IWW6 846 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 NPWQ8N729 165 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 WFDC5Q8TCV5 224 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 EDAQ92838 391 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 HDAC11Q96DB2 347 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 OLFM3Q96PB7 478 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 ELOVL2Q9NXB9 296 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 NCOR1O75376 2440 aa24■■□□□ 1.43
RAB40C-212ENST00000569575 COL4A3Q01955 1670 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 COL6A3P12111 3177 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 A0A0D9SEW6 157 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 DCXO43602 365 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 DLDP09622 509 aaKnown RBP23.99■■□□□ 1.43
RAB40C-212ENST00000569575 CXCR5P32302 372 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 GARSP41250 739 aaKnown RBP23.99■■□□□ 1.43
RAB40C-212ENST00000569575 PAFAH1B1P43034 410 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 CLCN6P51797 869 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 IL10RBQ08334 325 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 RFTN1Q14699 578 aaPredicted RBP23.99■■□□□ 1.43
RAB40C-212ENST00000569575 LONRF2Q1L5Z9 754 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 INO80DQ53TQ3 878 aaPredicted RBP23.99■■□□□ 1.43
RAB40C-212ENST00000569575 MBLAC2Q68D91 279 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 ASTLQ6HA08 431 aaPredicted RBP23.99■■□□□ 1.43
RAB40C-212ENST00000569575 PSMB7Q99436 277 aa23.99■■□□□ 1.43
RAB40C-212ENST00000569575 PLA2G4CQ9UP65 541 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms