RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 CHI3L2Q15782 390 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 PDCD7Q8N8D1 485 aaKnown RBP8.04□□□□□ -1.12
LINC00559-201ENST00000569476 PPHLN1Q8NEY8 458 aaKnown RBP8.04□□□□□ -1.12
LINC00559-201ENST00000569476 PIWIL2Q8TC59 973 aaKnown RBP8.04□□□□□ -1.12
LINC00559-201ENST00000569476 DQX1Q8TE96 717 aaKnown RBP8.04□□□□□ -1.12
LINC00559-201ENST00000569476 SPATA17Q96L03 361 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 ZNF599Q96NL3 588 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 TBL1YQ9BQ87 522 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 CCDC106Q9BWC9 280 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 TBC1D10AQ9BXI6 508 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 RHOJQ9H4E5 214 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC00559-201ENST00000569476 DDIT4Q9NX09 232 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 HSFX1Q9UBD0 423 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 STOML1Q9UBI4 398 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 BAIAP2L1Q9UHR4 511 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 NEU3Q9UQ49 428 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 TLR6Q9Y2C9 796 aa8.04□□□□□ -1.12
LINC00559-201ENST00000569476 ZCWPW2A0A1B0GU75 182 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 KCNU1A8MYU2 1149 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 FCHO1O14526 889 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 HOXA2O43364 376 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 FGF3P11487 239 aaPredicted RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 NCAM1P13591 858 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 GNAZP19086 355 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 DNAJB13P59910 316 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 XIAPP98170 497 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 DSC1Q08554 894 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ELAVL2Q12926 359 aaKnown RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 FASTKD1Q53R41 847 aaKnown RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 HP1BP3Q5SSJ5 553 aaPredicted RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ZNF618Q5T7W0 954 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 TEDDM1Q5T9Z0 273 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 CD300LGQ6UXG3 332 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 MTDHQ86UE4 582 aaKnown RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 UMODL1-AS1Q8N2C9 162 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 SLC43A3Q8NBI5 491 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 TRPV1Q8NER1 839 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 RFWD2Q8NHY2 731 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 JADE3Q92613 823 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 C19orf43Q9BQ61 176 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 GORASP1Q9BQQ3 440 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 TMEM175Q9BSA9 504 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 YJEFN3A6XGL0 299 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 PIK3R2O00459 728 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 NRP1O14786 923 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 AVILO75366 819 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 CIB2O75838 187 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ESRRAP11474 423 aaPredicted RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 CES1P23141 567 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ADRA1AP35348 466 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 CLCNKBP51801 687 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 SATB1Q01826 763 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 RING1Q06587 406 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 TIGD5Q53EQ6 642 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 SYPL2Q5VXT5 272 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 PKN3Q6P5Z2 889 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ZYG11AQ6WRX3 759 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 TAC4Q86UU9 113 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 MON1AQ86VX9 555 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 SPATA2LQ8IUW3 424 aaPredicted RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ATPAF2Q8N5M1 289 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 RTL3Q8N8U3 475 aaKnown RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ARMC2Q8NEN0 867 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ZSCAN18Q8TBC5 510 aaPredicted RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 TSPAN17Q96FV3 270 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 GAD1Q99259 594 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 LGMNQ99538 433 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 GLOD4Q9HC38 313 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 PCMTD2Q9NV79 361 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 COPG2Q9UBF2 871 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ZNF212Q9UDV6 495 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 OR12D3Q9UGF7 316 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ANGPTL2Q9UKU9 493 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 LRRC42Q9Y546 428 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 TNFRSF10BO14763 440 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 TPP1O14773 563 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 NPHS1O60500 1241 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 FKBP6O75344 327 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 MYL2P10916 166 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 RHOQP17081 205 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 MAPKAPK2P49137 400 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ABCE1P61221 599 aaKnown RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 IRX4P78413 519 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 GALNT1Q10472 559 aaPredicted RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 PDE1CQ14123 709 aaPredicted RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 C5orf22Q49AR2 442 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 PRAMEF19Q5SWL8 479 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 BSPRYQ5W0U4 402 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 CST9Q5W186 159 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 BTBD8Q5XKL5 378 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 OVOS1Q6IE37 1185 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 ATP6V0D2Q8N8Y2 350 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 CCNYQ8ND76 341 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 FAM13CQ8NE31 585 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 PPP1R14CQ8TAE6 165 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 PTPRN2Q92932 1015 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 AZIN2Q96A70 460 aa8.03□□□□□ -1.12
LINC00559-201ENST00000569476 MLPHQ9BV36 600 aaPredicted RBP8.03□□□□□ -1.12
LINC00559-201ENST00000569476 POPDC3Q9HBV1 291 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms