RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 DNAAF5Q86Y56 855 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 EMC1Q8N766 993 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 CTNNBL1Q8WYA6 563 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 IGSF8Q969P0 613 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 NT5C3BQ969T7 300 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 PGAP3Q96FM1 320 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 ADAM33Q9BZ11 813 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 CD93Q9NPY3 652 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 ITM2CQ9NQX7 267 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 ARHGEF38Q9NXL2 777 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 DLL3Q9NYJ7 618 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 TMEM59LQ9UK28 342 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 INTS6Q9UL03 887 aaKnown RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 TFR2Q9UP52 801 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 ERVW-1Q9UQF0 538 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 ZNF500O60304 480 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 CYP1A2P05177 515 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 ITPKAP23677 461 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 OXTRP30559 389 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 SDC4P31431 198 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 RDXP35241 583 aaKnown RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 CTSOP43234 321 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 TPMTP51580 245 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 COPAP53621 1224 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 ATXN1P54253 815 aaKnown RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 GSCP56915 257 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 ZNF33AQ06730 810 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 SLC12A1Q13621 1099 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 CDO1Q16878 200 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 PLEKHG6Q3KR16 790 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 ARCQ7LC44 396 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 C14orf80Q86SX3 495 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 METTL3Q86U44 580 aaKnown RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 FAM124AQ86V42 546 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 SYT12Q8IV01 421 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 APCDD1Q8J025 514 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 RNF10Q8N5U6 811 aaKnown RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 RXFP2Q8WXD0 754 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 TOE1Q96GM8 510 aaKnown RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 CALR3Q96L12 384 aaKnown RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 RTKNQ9BST9 563 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 SELENOOQ9BVL4 669 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 THAP2Q9H0W7 228 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 MTG2Q9H4K7 406 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 LZTFL1Q9NQ48 299 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 PRSS16Q9NQE7 514 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 SNX10Q9Y5X0 201 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 DCHS1Q96JQ0 3298 aa14.89□□□□□ -0.03
COMMD4-225ENST00000569245 ATXN2Q99700 1313 aaKnown RBP14.89□□□□□ -0.03
COMMD4-225ENST00000569245 CEP250Q9BV73 2442 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 PATE3B3GLJ2 98 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 SRGAP2O75044 1071 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 CLDN11O75508 207 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 GJB6O95452 261 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 DNTTP04053 509 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 SRPRAP08240 638 aaKnown RBP14.88□□□□□ -0.03
COMMD4-225ENST00000569245 KRT3P12035 628 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 MZF1P28698 734 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-225ENST00000569245 NNMTP40261 264 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 DPP6P42658 865 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 SYCP2LQ5T4T6 812 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 IL31Q6EBC2 164 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 TRNP1Q6NT89 227 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 FAM131BQ86XD5 332 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 RGL4Q8IZJ4 473 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 GANCQ8TET4 914 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 RFFLQ8WZ73 363 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 ZNF653Q96CK0 615 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 ARHGEF26Q96DR7 871 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 RPL10LQ96L21 214 aaKnown RBP14.88□□□□□ -0.03
COMMD4-225ENST00000569245 HSPA12BQ96MM6 686 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 GPR174Q9BXC1 333 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 FBRSQ9HAH7 460 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 ANLNQ9NQW6 1124 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 RXFP3Q9NSD7 469 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 USP36Q9P275 1121 aaKnown RBP14.88□□□□□ -0.03
COMMD4-225ENST00000569245 LAMA1P25391 3075 aa14.88□□□□□ -0.03
COMMD4-225ENST00000569245 DCDC2BA2VCK2 349 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 TTC34A8MYJ7 566 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 SLC30A4O14863 429 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 RNASEH1O60930 286 aaKnown RBP14.87□□□□□ -0.03
COMMD4-225ENST00000569245 MTA2O94776 668 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 CFIP05156 583 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 IRAK1P51617 712 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 HADHBP55084 474 aaKnown RBP14.87□□□□□ -0.03
COMMD4-225ENST00000569245 CDH4P55283 916 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 SULT2A1Q06520 285 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 C15orf59Q2T9L4 293 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-225ENST00000569245 HNRNPA1L2Q32P51 320 aaKnown RBP14.87□□□□□ -0.03
COMMD4-225ENST00000569245 ARL13BQ3SXY8 428 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 CCDC14Q49A88 953 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 TRIM61Q5EBN2 209 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 ACBD5Q5T8D3 534 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-225ENST00000569245 STPG1Q5TH74 334 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 PLEKHA7Q6IQ23 1121 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 CXorf57Q6NSI4 855 aaKnown RBP14.87□□□□□ -0.03
COMMD4-225ENST00000569245 DNAJC24Q6P3W2 148 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 NYAP1Q6ZVC0 841 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 ERMP1Q7Z2K6 904 aa14.87□□□□□ -0.03
COMMD4-225ENST00000569245 RHOT2Q8IXI1 618 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms