RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TTC31Q49AM3 519 aaPredicted RBP18.52■□□□□ 0.56
SMPD3-211ENST00000568373 PIK3R6Q5UE93 754 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 FYB2Q5VWT5 728 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 AFMIDQ63HM1 303 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 C14orf80Q86SX3 495 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 RASSF3Q86WH2 238 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 NPAS4Q8IUM7 802 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 CNPY4Q8N129 248 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 NDUFAF2Q8N183 169 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 CRIPAKQ8N1N5 446 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 GPR152Q8TDT2 470 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 USP33Q8TEY7 942 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 ZFATQ9P243 1243 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 PSAT1Q9Y617 370 aa18.52■□□□□ 0.56
SMPD3-211ENST00000568373 PSMD3O43242 534 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 USP1O94782 785 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 ERVK-10P10266 1014 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 NPY2RP49146 381 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 GPR17Q13304 367 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 FRG1Q14331 258 aaKnown RBP18.51■□□□□ 0.55
SMPD3-211ENST00000568373 NAPEPLDQ6IQ20 393 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 OTOP3Q7RTS5 596 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMPD3-211ENST00000568373 C10orf82Q8WW14 230 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 FBXO32Q969P5 355 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 ZNF669Q96BR6 464 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-211ENST00000568373 IL12RB2Q99665 862 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 MRPL9Q9BYD2 267 aaKnown RBP18.51■□□□□ 0.55
SMPD3-211ENST00000568373 IL22Q9GZX6 179 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 UNC93B1Q9H1C4 597 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 WBP1LQ9NX94 342 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 CLIC5Q9NZA1 410 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 UBP1Q9NZI7 540 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 MPP6Q9NZW5 540 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 MAGEB16A2A368 324 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 MTMR11A4FU01 709 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 WASH4PA8MWX3 477 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 AP3B1O00203 1094 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 MATN3O15232 486 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 SOAT2O75908 522 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 RTN3O95197 1032 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-211ENST00000568373 NEFHP12036 1026 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 ELAVL2Q12926 359 aaKnown RBP18.51■□□□□ 0.55
SMPD3-211ENST00000568373 BNIP1Q12981 228 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 CERCAMQ5T4B2 595 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 FBXW10Q5XX13 1052 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 RSPO2Q6UXX9 243 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-211ENST00000568373 PACS2Q86VP3 889 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 SPPL2BQ8TCT7 592 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 ACMSDQ8TDX5 336 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 ZNF419Q96HQ0 510 aaPredicted RBP18.51■□□□□ 0.55
SMPD3-211ENST00000568373 APOL2Q9BQE5 337 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 TSSK1BQ9BXA7 367 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 IL1RAPL1Q9NZN1 696 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 FNIP2Q9P278 1114 aa18.51■□□□□ 0.55
SMPD3-211ENST00000568373 AAR2Q9Y312 384 aaKnown RBP18.51■□□□□ 0.55
SMPD3-211ENST00000568373 NYNRINQ9P2P1 1898 aaKnown RBP18.5■□□□□ 0.55
SMPD3-211ENST00000568373 FAM237BA0A1B0GVD1 139 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 KLF11O14901 512 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 TBC1D4O60343 1298 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 ALDOAP04075 364 aaKnown RBP18.5■□□□□ 0.55
SMPD3-211ENST00000568373 GALTP07902 379 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 TROVE2P10155 538 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMPD3-211ENST00000568373 BGNP21810 368 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 EFEMP1Q12805 493 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 CDH17Q12864 832 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 MGAT5BQ3V5L5 792 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 ANKRD20A4Q4UJ75 823 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 RTP2Q5QGT7 225 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 TIGD7Q6NT04 549 aaPredicted RBP18.5■□□□□ 0.55
SMPD3-211ENST00000568373 LINC00523Q86TU6 105 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 LRRC49Q8IUZ0 686 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 ANKLE1Q8NAG6 615 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 ARMC2Q8NEN0 867 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 ZNF398Q8TD17 642 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 TMEM175Q9BSA9 504 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 CRISPLD1Q9H336 500 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 TXNDC16Q9P2K2 825 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 SLC27A5Q9Y2P5 690 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 TRIM17Q9Y577 477 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 ZCWPW2A0A1B0GU75 182 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.5■□□□□ 0.55
SMPD3-211ENST00000568373 NT5C1B-RDH14C9J2C7 533 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 ATP9BO43861 1147 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 PQBP1O60828 265 aaKnown RBP18.5■□□□□ 0.55
SMPD3-211ENST00000568373 VNN2O95498 520 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 ITGA2BP08514 1039 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 ALDH3A1P30838 453 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 GP5P40197 560 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 PSEN1P49768 467 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 SMARCB1Q12824 385 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 RNF19BQ6ZMZ0 732 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 SPATA17Q96L03 361 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 FCRL5Q96RD9 977 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 SEPT5Q99719 369 aaPredicted RBP18.5■□□□□ 0.55
SMPD3-211ENST00000568373 CPNE1Q99829 537 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 BEGAINQ9BUH8 593 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 NPHS2Q9NP85 383 aa18.5■□□□□ 0.55
SMPD3-211ENST00000568373 TLR8Q9NR97 1041 aaKnown RBP18.5■□□□□ 0.55
SMPD3-211ENST00000568373 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms