RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 RMND5AQ9H871 391 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 TRIM45Q9H8W5 580 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 EHD3Q9NZN3 535 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 POLG2Q9UHN1 485 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 RAB26Q9ULW5 256 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SLC8A2Q9UPR5 921 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 RAP2CQ9Y3L5 183 aa12.62□□□□□ -0.39
CSPG4P13-202ENST00000567704 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 DHRS12A0PJE2 317 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 STX7O15400 261 aaKnown RBP12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 VPS26AO75436 327 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 CXCL8P10145 99 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 NAB1Q13506 487 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 TRIQKQ629K1 86 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 KLHL17Q6TDP4 642 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 MAP4K3Q8IVH8 894 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 TTLL6Q8N841 843 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 OR52K1Q8NGK4 314 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 ITFG2Q969R8 447 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 CERS2Q96G23 380 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 BTBD9Q96Q07 612 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 RAD54BQ9Y620 910 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 ATP6AP2A0A1C7CYW4 349 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 PIPSLA2A3N6 862 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 WTIPA6NIX2 430 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 SIN3BO75182 1162 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 ATP6AP2O75787 350 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 MICAL2O94851 1124 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 CPSF4O95639 269 aaKnown RBP12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 IMPDH2P12268 514 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 TCF7P36402 384 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 NEK3P51956 506 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 SLC5A3P53794 718 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 PLCL1Q15111 1095 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 SLC44A1Q8WWI5 657 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 RSPH1Q8WYR4 309 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 SH3KBP1Q96B97 665 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 FAM84AQ96KN4 292 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 SYTL2Q9HCH5 934 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 SPASTQ9UBP0 616 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 PCDHA11Q9Y5I1 949 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 NR2C2P49116 596 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 SLC7A2P52569 658 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 NCF4Q15080 339 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 VWA5B1Q5TIE3 1220 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 ANGEL2Q5VTE6 544 aaKnown RBP12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 CMC1Q7Z7K0 106 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 FAM228AQ86W67 206 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 C10orf82Q8WW14 230 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 ACOX2Q99424 681 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 GPR63Q9BZJ6 419 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 TRIM17Q9Y577 477 aa12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 ASTN2O75129 1339 aaPredicted RBP12.61□□□□□ -0.39
CSPG4P13-202ENST00000567704 SIGLEC16A6NMB1 481 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 CENPXA8MT69 81 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 F8W810 466 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 AGRPO00253 132 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 CLCN3P51790 818 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 NDST1P52848 882 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 NOMO3P69849 1222 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 ASTE1Q2TB18 679 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 SPESP1Q6UW49 350 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 CRAMP1Q96RY5 1269 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 DPY30Q9C005 99 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZFYVE28Q9HCC9 887 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 KRT84Q9NSB2 600 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 DKK3Q9UBP4 350 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 DUSP12Q9UNI6 340 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 FADS3Q9Y5Q0 445 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 KNDC1Q76NI1 1749 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 FAM95CA0A1B0GW59 222 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 SNPHO15079 494 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 STAG3L1P0CL83 205 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 PCNAP12004 261 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 NPY2RP49146 381 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 CCT3P49368 545 aaKnown RBP12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 BCAT1P54687 386 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 SV2CQ496J9 727 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 GALNT18Q6P9A2 607 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 AMER2Q8N7J2 671 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 S100ZQ8WXG8 99 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 HTRA1Q92743 480 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZHX1-C8orf76Q96EF9 292 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 C7orf26Q96N11 449 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 MMP19Q99542 508 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 COQ6Q9Y2Z9 468 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 MTF2Q9Y483 593 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 EFCAB10A6NFE3 127 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 E5RJQ4 531 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 PLA2G6O60733 806 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 SHMT1P34896 483 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 MSLNQ13421 630 aaPredicted RBP12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 TYW3Q6IPR3 259 aaKnown RBP12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 TTC30AQ86WT1 665 aa12.6□□□□□ -0.39
CSPG4P13-202ENST00000567704 SLC9A9Q8IVB4 645 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms