RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SCAPQ12770 1279 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 AUHQ13825 339 aaKnown RBP19.14■□□□□ 0.65
LINC01238-205ENST00000567549 NAPEPLDQ6IQ20 393 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 FBXL22Q6P050 247 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 FAM183BPQ6ZVS7 135 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 SLCO6A1Q86UG4 719 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 IQCHQ86VS3 1027 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 PASD1Q8IV76 773 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 MYEOVQ96EZ4 313 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 FAM129BQ96TA1 746 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 MUC3BQ9H195 1237 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 WDCPQ9H6R7 721 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 ERVMER34-1Q9H9K5 563 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 PCDHGA1Q9Y5H4 931 aa19.14■□□□□ 0.65
LINC01238-205ENST00000567549 PES1O00541 588 aaKnown RBP19.13■□□□□ 0.65
LINC01238-205ENST00000567549 ATP9BO43861 1147 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 TPM2P07951 284 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 ERCC5P28715 1186 aaPredicted RBP19.13■□□□□ 0.65
LINC01238-205ENST00000567549 SETMARQ53H47 684 aaPredicted RBP19.13■□□□□ 0.65
LINC01238-205ENST00000567549 HS1BP3Q53T59 392 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 CT47A1Q5JQC4 288 aaPredicted RBP19.13■□□□□ 0.65
LINC01238-205ENST00000567549 GJB7Q6PEY0 223 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 OLFML1Q6UWY5 402 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 MFSD2AQ8NA29 543 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 SLC6A18Q96N87 628 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 FEM1AQ9BSK4 669 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 NDST4Q9H3R1 872 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 DYRK4Q9NR20 520 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.13■□□□□ 0.65
LINC01238-205ENST00000567549 DKK4Q9UBT3 224 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 SERGEFQ9UGK8 458 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 VANGL2Q9ULK5 521 aa19.13■□□□□ 0.65
LINC01238-205ENST00000567549 TP53BP1Q12888 1972 aaPredicted RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 COL5A1P20908 1838 aaPredicted RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 GOLGA8CPA6NN73 597 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 MCF2LO15068 1137 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 RNGTTO60942 597 aaKnown RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 GRAP2O75791 330 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 DKK1O94907 266 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 LSM8O95777 96 aaKnown RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 ATXN1LP0C7T5 689 aaKnown RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 RECQLP46063 649 aaPredicted RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 STK19P49842 368 aaPredicted RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 CLCN6P51797 869 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 STAT4Q14765 748 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 TAF5Q15542 800 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 NFKBIBQ15653 356 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 C6orf118Q5T5N4 469 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 CXorf57Q6NSI4 855 aaKnown RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 SETD3Q86TU7 594 aaPredicted RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 AADATQ8N5Z0 425 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 PGAP3Q96FM1 320 aaPredicted RBP19.12■□□□□ 0.65
LINC01238-205ENST00000567549 GBP4Q96PP9 640 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 ORAI3Q9BRQ5 295 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 PREBQ9HCU5 417 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 ACP6Q9NPH0 428 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 TBC1D30Q9Y2I9 924 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 CHD6Q8TD26 2715 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 PTPRBP23467 1997 aa19.12■□□□□ 0.65
LINC01238-205ENST00000567549 PLXNA2O75051 1894 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 CFAP47Q6ZTR5 3102 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 TLR4O00206 839 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 LATO43561 262 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 PLRG1O43660 514 aaKnown RBP19.11■□□□□ 0.65
LINC01238-205ENST00000567549 PAGE1O75459 146 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 LDOC1O95751 146 aaPredicted RBP19.11■□□□□ 0.65
LINC01238-205ENST00000567549 RHOCP08134 193 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 RAPGEF1Q13905 1077 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 DLG2Q15700 870 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 C5orf22Q49AR2 442 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 VWA3BQ502W6 1294 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 NEK5Q6P3R8 708 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 TMPRSS12Q86WS5 348 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 TRIM69Q86WT6 500 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 FAM71AQ8IYT1 594 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 WDTC1Q8N5D0 677 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 PDCD7Q8N8D1 485 aaKnown RBP19.11■□□□□ 0.65
LINC01238-205ENST00000567549 C18orf8Q96DM3 657 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 PPP1R16AQ96I34 528 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 TUBGCP2Q9BSJ2 902 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 SIK2Q9H0K1 926 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 LHX6Q9UPM6 363 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 HS3ST2Q9Y278 367 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 BTBD3Q9Y2F9 522 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 HS3ST4Q9Y661 456 aa19.11■□□□□ 0.65
LINC01238-205ENST00000567549 PRAMEF26H0Y7S4 382 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 FOXN3O00409 490 aaPredicted RBP19.1■□□□□ 0.65
LINC01238-205ENST00000567549 PRNPP04156 253 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 ERBB2P04626 1255 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 SULT1E1P49888 294 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 PITX1P78337 314 aaPredicted RBP19.1■□□□□ 0.65
LINC01238-205ENST00000567549 DEUP1Q05D60 604 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 LAYNQ6UX15 382 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 CLEC17AQ6ZS10 378 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 SLC47A2Q86VL8 602 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 ERICH1Q86X53 443 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 CIR1Q86X95 450 aaPredicted RBP19.1■□□□□ 0.65
LINC01238-205ENST00000567549 SH2D3CQ8N5H7 860 aa19.1■□□□□ 0.65
LINC01238-205ENST00000567549 ATP11CQ8NB49 1132 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms