RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 RALBP11234 206 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 PSMB4P28070 264 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 GRK4P32298 578 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 SPRP35270 261 aaPredicted RBP17.13■□□□□ 0.33
CMTM3-213ENST00000566756 HCAR3P49019 387 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 IDH3AP50213 366 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 INTS6LQ5JSJ4 861 aaKnown RBP17.13■□□□□ 0.33
CMTM3-213ENST00000566756 METTL21CQ5VZV1 264 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 MRPL10Q7Z7H8 261 aaKnown RBP17.13■□□□□ 0.33
CMTM3-213ENST00000566756 TMEM135Q86UB9 458 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 PIGZQ86VD9 579 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 C10orf107Q8IVU9 208 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 TOP6BLQ8N6T0 577 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 SLC43A3Q8NBI5 491 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 PGBD4Q96DM1 585 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 RBBP8Q99708 897 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 LPIN3Q9BQK8 851 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 PRDM12Q9H4Q4 367 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 AGO3Q9H9G7 860 aaKnown RBP17.13■□□□□ 0.33
CMTM3-213ENST00000566756 PCDHB12Q9Y5F1 795 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 CDY1Q9Y6F8 540 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 WASF2Q9Y6W5 498 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 TMEM114B3SHH9 223 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 ZNF623O75123 536 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 USP1O94782 785 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 PDGFRBP09619 1106 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 KCNA4P22459 653 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 LMO2P25791 158 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 ZNF135P52742 658 aaPredicted RBP17.13■□□□□ 0.33
CMTM3-213ENST00000566756 LIMK2P53671 638 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 SCAPQ12770 1279 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 MDH1BQ5I0G3 518 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 OR52E8Q6IFG1 317 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 PGM2L1Q6PCE3 622 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 CCDC33Q8N5R6 958 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 ACTRT2Q8TDY3 377 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 SREK1Q8WXA9 508 aaKnown RBP17.13■□□□□ 0.33
CMTM3-213ENST00000566756 PPP1R10Q96QC0 940 aaKnown RBP17.13■□□□□ 0.33
CMTM3-213ENST00000566756 TMEM216Q9P0N5 145 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 PSAT1Q9Y617 370 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 RPS6KL1Q9Y6S9 549 aa17.13■□□□□ 0.33
CMTM3-213ENST00000566756 MAGEB16A2A368 324 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 PTGESO14684 152 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 LYPLA1O75608 230 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-213ENST00000566756 AP2A1O95782 977 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 CPA3P15088 417 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 HADHAP40939 763 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 TSC2P49815 1807 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 RAB27AP51159 221 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 HK2P52789 917 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 CRADDP78560 199 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 XIAPP98170 497 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 DSG1Q02413 1049 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 RFX8Q6ZV50 586 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 MAVSQ7Z434 540 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 B3GALNT2Q8NCR0 500 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 IFT43Q96FT9 208 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 SNX15Q9NRS6 342 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 SLC38A7Q9NVC3 462 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 ZDHHC7Q9NXF8 308 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 PDP2Q9P2J9 529 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 MID2Q9UJV3 735 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 PADI3Q9ULW8 664 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 NOD1Q9Y239 953 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 GIT1Q9Y2X7 761 aa17.12■□□□□ 0.33
CMTM3-213ENST00000566756 CCDC189A1A4V9 331 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 C9IYK1 514 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 AP3B1O00203 1094 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 EEF2KO00418 725 aaKnown RBP17.11■□□□□ 0.33
CMTM3-213ENST00000566756 SPTLC1O15269 473 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 AHCYL1O43865 530 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 HUS1O60921 280 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 FESP07332 822 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 NPR3P17342 541 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 DNAJB2P25686 324 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 CSE1LP55060 971 aaKnown RBP17.11■□□□□ 0.33
CMTM3-213ENST00000566756 IRX4P78413 519 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 SOX4Q06945 474 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-213ENST00000566756 ADIGQ0VDE8 80 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 HNRNPDQ14103 355 aaKnown RBP17.11■□□□□ 0.33
CMTM3-213ENST00000566756 DSC3Q14574 896 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 DCAF6Q58WW2 860 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 FSCBQ5H9T9 825 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 LCA5Q86VQ0 697 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.11■□□□□ 0.33
CMTM3-213ENST00000566756 TRAPPC9Q96Q05 1148 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 SEZ6LQ9BYH1 1024 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 VCX3BQ9H321 246 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 S100A14Q9HCY8 104 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 CASS4Q9NQ75 786 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 TRMT13Q9NUP7 481 aaKnown RBP17.11■□□□□ 0.33
CMTM3-213ENST00000566756 BFARQ9NZS9 450 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 DLGAP2Q9P1A6 1054 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 PCNTO95613 3336 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 HCRTO43612 131 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 FBXO21O94952 628 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 LPIN1Q14693 890 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 PDPK2PQ6A1A2 396 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 PID1Q7Z2X4 250 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 CLEC14AQ86T13 490 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms