RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 CDH4P55283 916 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 OVGP1Q12889 678 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 NME3Q13232 169 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 PASD1Q8IV76 773 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 FAM71AQ8IYT1 594 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 MSANTD4Q8NCY6 345 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 FRS2Q8WU20 508 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 CCDC114Q96M63 670 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 SLC6A18Q96N87 628 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 ERVMER34-1Q9H9K5 563 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 COX16Q9P0S2 106 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 DKK4Q9UBT3 224 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 FTSJ1Q9UET6 329 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 DMTF1Q9Y222 760 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 TBC1D30Q9Y2I9 924 aa28.47■■■□□ 2.15
UBFD1-206ENST00000566669 FARP1Q9Y4F1 1045 aaPredicted RBP28.47■■■□□ 2.15
UBFD1-206ENST00000566669 M0QYT0 321 aa28.46■■■□□ 2.15
UBFD1-206ENST00000566669 ATXN1LP0C7T5 689 aaKnown RBP28.46■■■□□ 2.15
UBFD1-206ENST00000566669 ERCC5P28715 1186 aaPredicted RBP28.46■■■□□ 2.15
UBFD1-206ENST00000566669 STK19P49842 368 aaPredicted RBP28.46■■■□□ 2.15
UBFD1-206ENST00000566669 KRT83P78385 493 aa28.46■■■□□ 2.15
UBFD1-206ENST00000566669 PRPF39Q86UA1 669 aaKnown RBP28.46■■■□□ 2.15
UBFD1-206ENST00000566669 IQCHQ86VS3 1027 aa28.46■■■□□ 2.15
UBFD1-206ENST00000566669 PGAP3Q96FM1 320 aaPredicted RBP28.46■■■□□ 2.15
UBFD1-206ENST00000566669 PDCL3Q9H2J4 239 aa28.46■■■□□ 2.15
UBFD1-206ENST00000566669 NDST4Q9H3R1 872 aa28.46■■■□□ 2.15
UBFD1-206ENST00000566669 SIX2Q9NPC8 291 aa28.46■■■□□ 2.15
UBFD1-206ENST00000566669 VPS28Q9UK41 221 aa28.46■■■□□ 2.15
UBFD1-206ENST00000566669 VANGL2Q9ULK5 521 aa28.46■■■□□ 2.15
UBFD1-206ENST00000566669 BTBD3Q9Y2F9 522 aa28.46■■■□□ 2.15
UBFD1-206ENST00000566669 TBC1D3DA0A087WVF3 549 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 TBC1D3IA0A087WXS9 549 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 TBC1D3EA0A087X179 549 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 TBC1D3KA0A087X1G2 549 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 TBC1D3FA6NER0 549 aaPredicted RBP28.45■■■□□ 2.14
UBFD1-206ENST00000566669 TBC1D3LB9A6J9 549 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 FOXN3O00409 490 aaPredicted RBP28.45■■■□□ 2.14
UBFD1-206ENST00000566669 MCF2LO15068 1137 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 ERBB2P04626 1255 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 TBC1D3HP0C7X1 549 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 CLCN1P35523 988 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 KCNJ12Q14500 433 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 ACCSLQ4AC99 568 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 CT47A1Q5JQC4 288 aaPredicted RBP28.45■■■□□ 2.14
UBFD1-206ENST00000566669 TBC1D3GQ6DHY5 549 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 TBC1D3CQ6IPX1 549 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 TBC1D3Q8IZP1 549 aaPredicted RBP28.45■■■□□ 2.14
UBFD1-206ENST00000566669 ALG14Q96F25 216 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 SERAC1Q96JX3 654 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 C2orf49Q9BVC5 232 aaPredicted RBP28.45■■■□□ 2.14
UBFD1-206ENST00000566669 WDCPQ9H6R7 721 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.45■■■□□ 2.14
UBFD1-206ENST00000566669 PCDHGA1Q9Y5H4 931 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 HS3ST4Q9Y661 456 aa28.45■■■□□ 2.14
UBFD1-206ENST00000566669 DSPP15924 2871 aaKnown RBP28.45■■■□□ 2.14
UBFD1-206ENST00000566669 E9PAM4 449 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 PAGE1O75459 146 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 GRAP2O75791 330 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 CDH5P33151 784 aaPredicted RBP28.44■■■□□ 2.14
UBFD1-206ENST00000566669 CXCR3P49682 368 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 PTPN20Q4JDL3 420 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 VWA3BQ502W6 1294 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 NAPEPLDQ6IQ20 393 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 LAYNQ6UX15 382 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 LRRC31Q6UY01 552 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 SETD3Q86TU7 594 aaPredicted RBP28.44■■■□□ 2.14
UBFD1-206ENST00000566669 SLC47A2Q86VL8 602 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 CIR1Q86X95 450 aaPredicted RBP28.44■■■□□ 2.14
UBFD1-206ENST00000566669 MFSD2AQ8NA29 543 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 C1orf74Q96LT6 269 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 NPY6RQ99463 290 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 HS3ST2Q9Y278 367 aa28.44■■■□□ 2.14
UBFD1-206ENST00000566669 A0A1W2PR77 199 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 PLRG1O43660 514 aaKnown RBP28.43■■■□□ 2.14
UBFD1-206ENST00000566669 C1SP09871 688 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 DRD3P35462 400 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 DLG2Q15700 870 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 KCNT1Q5JUK3 1230 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP28.43■■■□□ 2.14
UBFD1-206ENST00000566669 TRIM69Q86WT6 500 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 NT5C3BQ969T7 300 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 TUBGCP2Q9BSJ2 902 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 ARHGEF38Q9NXL2 777 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 PPM1HQ9ULR3 514 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 OR51B4Q9Y5P0 310 aa28.43■■■□□ 2.14
UBFD1-206ENST00000566669 TLR4O00206 839 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 KCNK3O14649 394 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 LSM8O95777 96 aaKnown RBP28.42■■■□□ 2.14
UBFD1-206ENST00000566669 ITGAVP06756 1048 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 ZNF18P17022 549 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 GABRB2P47870 512 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 CLCN6P51797 869 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 APBA1Q02410 837 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 CENPCQ03188 943 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 SMAD1Q15797 465 aaKnown RBP28.42■■■□□ 2.14
UBFD1-206ENST00000566669 SH2D3CQ8N5H7 860 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 C18orf8Q96DM3 657 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 MUC3BQ9H195 1237 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 EBF2Q9HAK2 575 aa28.42■■■□□ 2.14
UBFD1-206ENST00000566669 PREBQ9HCU5 417 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms