RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 A0A1B0GTQ1 180 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3FA6NER0 549 aaPredicted RBP12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3LB9A6J9 549 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3HP0C7X1 549 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 ZNF18P17022 549 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 CD38P28907 300 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 NOS2P35228 1153 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 NUMBP49757 651 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 ADPRHP54922 357 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 BPIFB4P59827 614 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 SLC6A3Q01959 620 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 APBA1Q02410 837 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 EIF4EBP2Q13542 120 aaPredicted RBP12.29□□□□□ -0.44
UBR1-206ENST00000566493 AUHQ13825 339 aaKnown RBP12.29□□□□□ -0.44
UBR1-206ENST00000566493 ARSIQ5FYB1 569 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 KCNT1Q5JUK3 1230 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 FAM46CQ5VWP2 391 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3GQ6DHY5 549 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3CQ6IPX1 549 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.29□□□□□ -0.44
UBR1-206ENST00000566493 TMPRSS7Q7RTY8 843 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 PRPF39Q86UA1 669 aaKnown RBP12.29□□□□□ -0.44
UBR1-206ENST00000566493 FAM114A1Q8IWE2 563 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 TBC1D3Q8IZP1 549 aaPredicted RBP12.29□□□□□ -0.44
UBR1-206ENST00000566493 AADATQ8N5Z0 425 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 C1orf131Q8NDD1 294 aaKnown RBP12.29□□□□□ -0.44
UBR1-206ENST00000566493 OR8D1Q8WZ84 308 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 SERAC1Q96JX3 654 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 ELF4Q99607 663 aaPredicted RBP12.29□□□□□ -0.44
UBR1-206ENST00000566493 FEM1AQ9BSK4 669 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 GDF3Q9NR23 364 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 RRN3Q9NYV6 651 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 DNAJC12Q9UKB3 198 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 VANGL2Q9ULK5 521 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 LHX6Q9UPM6 363 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 PLXNB3Q9ULL4 1909 aa12.29□□□□□ -0.44
UBR1-206ENST00000566493 C1QTNF3-AMACRE9PGA6 284 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 M0QYT0 321 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 YKT6O15498 198 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 PAGE1O75459 146 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 CLDN11O75508 207 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 DAB1O75553 588 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 ERBB2P04626 1255 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 ITGAVP06756 1048 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 KCNJ12Q14500 433 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 MAN2A1Q16706 1144 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 PRAMEF14Q5SWL7 426 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 CXorf57Q6NSI4 855 aaKnown RBP12.28□□□□□ -0.44
UBR1-206ENST00000566493 ZDHHC17Q8IUH5 632 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 SIK2Q9H0K1 926 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 MUC3BQ9H195 1237 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 KDM4CQ9H3R0 1056 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 EBF2Q9HAK2 575 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 TOR4AQ9NXH8 423 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 VPS28Q9UK41 221 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 STAP1Q9ULZ2 295 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 PAXBP1Q9Y5B6 917 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 HS3ST4Q9Y661 456 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 WDFY3Q8IZQ1 3526 aa12.28□□□□□ -0.44
UBR1-206ENST00000566493 TLR4O00206 839 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 TAF4O00268 1085 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 FOXN3O00409 490 aaPredicted RBP12.27□□□□□ -0.45
UBR1-206ENST00000566493 SLC7A4O43246 635 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 ATP9BO43861 1147 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 MAGEC1O60732 1142 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 DKK1O94907 266 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 WNT1P04628 370 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 CAPNS1P04632 268 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 PRKCSHP14314 528 aaPredicted RBP12.27□□□□□ -0.45
UBR1-206ENST00000566493 VAV1P15498 845 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 NUDT1P36639 197 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 ARRB1P49407 418 aaPredicted RBP12.27□□□□□ -0.45
UBR1-206ENST00000566493 CDH4P55283 916 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 RNASE9P60153 205 aaKnown RBP12.27□□□□□ -0.45
UBR1-206ENST00000566493 KRT83P78385 493 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 CENPCQ03188 943 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 DLG2Q15700 870 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 OLFML1Q6UWY5 402 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 SLC26A9Q7LBE3 791 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 SLC47A2Q86VL8 602 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 GATAD2AQ86YP4 633 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 IRF2BP1Q8IU81 584 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 OXR1Q8N573 874 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 TMEM35BQ8NCS4 154 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 WDCPQ9H6R7 721 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 TMEM51Q9NW97 253 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBR1-206ENST00000566493 IGF2RP11717 2491 aa12.27□□□□□ -0.45
UBR1-206ENST00000566493 PES1O00541 588 aaKnown RBP12.26□□□□□ -0.45
UBR1-206ENST00000566493 ALOX15BO15296 676 aa12.26□□□□□ -0.45
UBR1-206ENST00000566493 BNIP3LO60238 219 aa12.26□□□□□ -0.45
UBR1-206ENST00000566493 LDOC1O95751 146 aaPredicted RBP12.26□□□□□ -0.45
UBR1-206ENST00000566493 F9P00740 461 aa12.26□□□□□ -0.45
UBR1-206ENST00000566493 RHOCP08134 193 aa12.26□□□□□ -0.45
UBR1-206ENST00000566493 DRD3P35462 400 aa12.26□□□□□ -0.45
UBR1-206ENST00000566493 CLCN1P35523 988 aa12.26□□□□□ -0.45
UBR1-206ENST00000566493 SULT1E1P49888 294 aa12.26□□□□□ -0.45
UBR1-206ENST00000566493 CCDC15Q0P6D6 951 aa12.26□□□□□ -0.45
UBR1-206ENST00000566493 STAT4Q14765 748 aa12.26□□□□□ -0.45
UBR1-206ENST00000566493 PTPN20Q4JDL3 420 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms