RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 MPPE1Q53F39 396 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 FBXO38Q6PIJ6 1188 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 ARHGAP36Q6ZRI8 547 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 SETD3Q86TU7 594 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 ZNF354CQ86Y25 554 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 MICALL1Q8N3F8 863 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 DDI1Q8WTU0 396 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 ANKRD7Q92527 254 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 HMCESQ96FZ2 354 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 FAM161BQ96MY7 647 aa19.2■□□□□ 0.66
COMMD4-213ENST00000565834 GAS2L1Q99501 681 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-213ENST00000565834 MYOFQ9NZM1 2061 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 A0A0A0MRY4 1105 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 KCNK1O00180 336 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 CLCN6P51797 869 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 FAM78AQ5JUQ0 283 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 IZUMO3Q5VZ72 239 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 TIGD7Q6NT04 549 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-213ENST00000565834 C4orf22Q6V702 233 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 CCDC110Q8TBZ0 833 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.19■□□□□ 0.66
COMMD4-213ENST00000565834 SMARCD2Q92925 531 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 RIPOR3Q96MK2 946 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 SPATA13Q96N96 652 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 ASB16Q96NS5 453 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 FAM129AQ9BZQ8 928 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 MAGEH1Q9H213 219 aa19.19■□□□□ 0.66
COMMD4-213ENST00000565834 IPO11Q9UI26 975 aaKnown RBP19.19■□□□□ 0.66
COMMD4-213ENST00000565834 DENND4AQ7Z401 1863 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 H0Y626 953 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 DNALI1O14645 258 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-213ENST00000565834 NDC80O14777 642 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 MAFKO60675 156 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 LUC7L3O95232 432 aaKnown RBP19.18■□□□□ 0.66
COMMD4-213ENST00000565834 CYBBP04839 570 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 RHOCP08134 193 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 ECHS1P30084 290 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 PLTPP55058 493 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 GNA12Q03113 381 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 WASHC5Q12768 1159 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 COL19A1Q14993 1142 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 MPP7Q5T2T1 576 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 PRPF38BQ5VTL8 546 aaKnown RBP19.18■□□□□ 0.66
COMMD4-213ENST00000565834 ARHGEF18Q6ZSZ5 1173 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 TPGS1Q6ZTW0 290 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 CARNMT1Q8N4J0 409 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 BHMTQ93088 406 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 OTUB2Q96DC9 234 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 PABPC5Q96DU9 382 aaKnown RBP19.18■□□□□ 0.66
COMMD4-213ENST00000565834 LRCH3Q96II8 777 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 CDH7Q9ULB5 785 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 TBC1D30Q9Y2I9 924 aa19.18■□□□□ 0.66
COMMD4-213ENST00000565834 ILVBLA1L0T0 632 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 SLC9A3R1O14745 358 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 OPHN1O60890 802 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 PTPN3P26045 913 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 LTBRP36941 435 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 MTHFRP42898 656 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ITGA8P53708 1063 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 SERINC3Q13530 473 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 CDH18Q13634 790 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ANKRD20A2Q5SQ80 823 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ANKRD20A1Q5TYW2 823 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ANKRD20A3Q5VUR7 823 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ZDHHC24Q6UX98 284 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 TAB3Q8N5C8 712 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 KIAA1958Q8N8K9 716 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ART4Q93070 314 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 VAT1Q99536 393 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 CEP41Q9BYV8 373 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 NEUROG2Q9H2A3 272 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 SP110Q9HB58 689 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ZDHHC18Q9NUE0 388 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ANAPC5Q9UJX4 755 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 TPX2Q9ULW0 747 aaKnown RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 MATN3O15232 486 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 VIPR2P41587 438 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 BASP1P80723 227 aaKnown RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 CAV1Q03135 178 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 FAM182AQ5T1J6 154 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 CXorf57Q6NSI4 855 aaKnown RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 PCGF5Q86SE9 256 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 CCDC117Q8IWD4 279 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ZNF567Q8N184 647 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 FBXO25Q8TCJ0 367 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 HNRNPLLQ8WVV9 542 aaKnown RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 ARHGEF2Q92974 986 aaKnown RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 MSLNLQ96KJ4 702 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 KLHL8Q9P2G9 620 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-213ENST00000565834 WNT6Q9Y6F9 365 aa19.17■□□□□ 0.66
COMMD4-213ENST00000565834 A0A0D9SEW6 157 aa19.16■□□□□ 0.66
COMMD4-213ENST00000565834 CCNB1P14635 433 aa19.16■□□□□ 0.66
COMMD4-213ENST00000565834 HOXD9P28356 352 aaPredicted RBP19.16■□□□□ 0.66
COMMD4-213ENST00000565834 ACVRL1P37023 503 aa19.16■□□□□ 0.66
COMMD4-213ENST00000565834 ETFBP38117 255 aa19.16■□□□□ 0.66
COMMD4-213ENST00000565834 IFI35P80217 286 aaPredicted RBP19.16■□□□□ 0.66
COMMD4-213ENST00000565834 ANO4Q32M45 955 aa19.16■□□□□ 0.66
COMMD4-213ENST00000565834 ZNF783Q6ZMS7 281 aa19.16■□□□□ 0.66
COMMD4-213ENST00000565834 MFN1Q8IWA4 741 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms