RNA–Protein interactions for RNA: ENST00000565738.1

KARS-205, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-205ENST00000565738 MLXIPLQ9NP71 852 aa6.9□□□□□ -1.3
KARS-205ENST00000565738 CD207Q9UJ71 328 aa6.9□□□□□ -1.3
KARS-205ENST00000565738 RAD54L2Q9Y4B4 1467 aa6.9□□□□□ -1.31
KARS-205ENST00000565738 TCRBV7S3A2A0A539 114 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 SLC22A23A1A5C7 686 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 GUCY1B2O75343 617 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 TBX18O95935 607 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 CD72P21854 359 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 ABCD3P28288 659 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 TYK2P29597 1187 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 HNF1BP35680 557 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 ELLP55199 621 aaPredicted RBP6.89□□□□□ -1.31
KARS-205ENST00000565738 PROK1P58294 105 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 IL13RA2Q14627 380 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 C10orf76Q5T2E6 689 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 FAAH2Q6GMR7 532 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 ACAD10Q6JQN1 1059 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 FAM180BQ6P0A1 224 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 ZNF782Q6ZMW2 699 aaPredicted RBP6.89□□□□□ -1.31
KARS-205ENST00000565738 EXD3Q8N9H8 876 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 FAM98AQ8NCA5 519 aaKnown RBP6.89□□□□□ -1.31
KARS-205ENST00000565738 OR52N4Q8NGI2 321 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 TBC1D22AQ8WUA7 517 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 RUFY2Q8WXA3 655 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 NCSTNQ92542 709 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 MAP4K1Q92918 833 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 APOPT1Q96IL0 206 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 R3HDMLQ9H3Y0 253 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 UPB1Q9UBR1 384 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 IPO11Q9UI26 975 aaKnown RBP6.89□□□□□ -1.31
KARS-205ENST00000565738 TNFSF13BQ9Y275 285 aa6.89□□□□□ -1.31
KARS-205ENST00000565738 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.88□□□□□ -1.31
KARS-205ENST00000565738 CXorf65A6NEN9 183 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 LINC01548A6NM66 108 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 RPS6KB1P23443 525 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 HOXA7P31268 230 aaPredicted RBP6.88□□□□□ -1.31
KARS-205ENST00000565738 PAFAH1B1P43034 410 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 MIS18BP1Q6P0N0 1132 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 ZNF788Q6ZQV5 615 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 RD3Q7Z3Z2 195 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 KLBQ86Z14 1044 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 TSPYL6Q8N831 410 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 C8orf58Q8NAV2 365 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 RFWD2Q8NHY2 731 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 ZFPM2Q8WW38 1151 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 P2RY11Q96G91 374 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 ERVK-5Q9HDB9 667 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 TXNRD2Q9NNW7 524 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 PDGFCQ9NRA1 345 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 TMEM248Q9NWD8 314 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 KLHL13Q9P2N7 655 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 DTX4Q9Y2E6 619 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 CYP46A1Q9Y6A2 500 aa6.88□□□□□ -1.31
KARS-205ENST00000565738 TDRD9Q8NDG6 1382 aaKnown RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 FAM90A7PA6NKC0 464 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 FAM90A22PA8MWA6 464 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 FAM90A12PA8MX19 464 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 FAM90A23PA8MXZ1 464 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 TNPO2O14787 897 aaKnown RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 MSI1O43347 362 aaKnown RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 STRNO43815 780 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 HBP1O60381 514 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 PROP1O75360 226 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 SGPL1O95470 568 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 NFATC1O95644 943 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 CASP6P55212 293 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 ZBTB16Q05516 673 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 SIM2Q14190 667 aaPredicted RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 GALNT3Q14435 633 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 UBAP2Q5T6F2 1119 aaKnown RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 FAM69AQ5T7M9 428 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 TMED8Q6PL24 325 aaPredicted RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 ZNF813Q6ZN06 617 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 ADGRF4Q8IZF3 695 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 PAQR4Q8N4S7 273 aaPredicted RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 FAM47BQ8NA70 645 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 HASPINQ8TF76 798 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 ELP4Q96EB1 424 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 EYA3Q99504 573 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.87□□□□□ -1.31
KARS-205ENST00000565738 SCNM1Q9BWG6 230 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 NPLQ9BXD5 320 aaPredicted RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 CADM1Q9BY67 442 aaKnown RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 INTS2Q9H0H0 1204 aaKnown RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 TTC12Q9H892 705 aaPredicted RBP6.87□□□□□ -1.31
KARS-205ENST00000565738 RIMBP3CA6NJZ7 1639 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 RIMBP3BA6NNM3 1639 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 RIMBP3Q9UFD9 1639 aa6.87□□□□□ -1.31
KARS-205ENST00000565738 ARHGEF17Q96PE2 2063 aaPredicted RBP6.86□□□□□ -1.31
KARS-205ENST00000565738 GRIN2BQ13224 1484 aa6.86□□□□□ -1.31
KARS-205ENST00000565738 SNAPC4Q5SXM2 1469 aa6.86□□□□□ -1.31
KARS-205ENST00000565738 MAGI1Q96QZ7 1491 aaPredicted RBP6.86□□□□□ -1.31
KARS-205ENST00000565738 CYP2D7A0A087X1C5 515 aa6.86□□□□□ -1.31
KARS-205ENST00000565738 B4E171 279 aa6.86□□□□□ -1.31
KARS-205ENST00000565738 SPTLC2O15270 562 aa6.86□□□□□ -1.31
KARS-205ENST00000565738 AKAP8O43823 692 aaKnown RBP6.86□□□□□ -1.31
KARS-205ENST00000565738 TULP3O75386 442 aa6.86□□□□□ -1.31
KARS-205ENST00000565738 CBX6O95503 412 aa6.86□□□□□ -1.31
KARS-205ENST00000565738 TSPAN7P41732 249 aa6.86□□□□□ -1.31
KARS-205ENST00000565738 MAPRE1Q15691 268 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms