RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 TRIM22Q8IYM9 498 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 RBFAQ8N0V3 343 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 FBXW8Q8N3Y1 598 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 SVOPQ8N4V2 548 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 DPP10Q8N608 796 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 UBL4BQ8N7F7 174 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 FAM71DQ8N9W8 422 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 OR8K3Q8NH51 312 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 SETD6Q8TBK2 473 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 SYTL5Q8TDW5 730 aaPredicted RBP6.41□□□□□ -1.38
PTPN9-204ENST00000564970 SH3RF3Q8TEJ3 882 aaPredicted RBP6.41□□□□□ -1.38
PTPN9-204ENST00000564970 PHF10Q8WUB8 498 aaKnown RBP6.41□□□□□ -1.38
PTPN9-204ENST00000564970 DEPDC1BQ8WUY9 529 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 BAP1Q92560 729 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 DHX38Q92620 1227 aaKnown RBP6.41□□□□□ -1.38
PTPN9-204ENST00000564970 PTP4A1Q93096 173 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 FATE1Q969F0 183 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 NXPE2Q96DL1 559 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 BTN2A3PQ96KV6 586 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 TCEANC2Q96MN5 208 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 QKIQ96PU8 341 aaKnown RBP eCLIP6.41□□□□□ -1.38
PTPN9-204ENST00000564970 SORT1Q99523 831 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 TSSK1BQ9BXA7 367 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 POLR1EQ9GZS1 481 aaKnown RBP6.41□□□□□ -1.38
PTPN9-204ENST00000564970 CDC42EP4Q9H3Q1 356 aaKnown RBP6.41□□□□□ -1.38
PTPN9-204ENST00000564970 ATP13A3Q9H7F0 1226 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 JMJD4Q9H9V9 463 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 ZFYVE28Q9HCC9 887 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 NPHS2Q9NP85 383 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 SCUBE2Q9NQ36 999 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 RGS18Q9NS28 235 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 IARS2Q9NSE4 1012 aaKnown RBP6.41□□□□□ -1.38
PTPN9-204ENST00000564970 UCKL1Q9NWZ5 548 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 GGA3Q9NZ52 723 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 MAT2BQ9NZL9 334 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 ACTR3BQ9P1U1 418 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 TJP2Q9UDY2 1190 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 PFDN2Q9UHV9 154 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 DBR1Q9UK59 544 aaKnown RBP6.41□□□□□ -1.38
PTPN9-204ENST00000564970 MED16Q9Y2X0 877 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 PCDHB5Q9Y5E4 795 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 SNX5Q9Y5X3 404 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 SCN4AP35499 1836 aa6.41□□□□□ -1.38
PTPN9-204ENST00000564970 DLG5Q8TDM6 1919 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 FAM208AQ9UK61 1670 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 LOC390937A0A1W2PQ73 354 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 TMEM82A0PJX8 343 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ARHGAP42A6NI28 874 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PDZK1P1A8MUH7 402 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 E7EWF7 191 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 K7ENM7 598 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ELL2O00472 640 aaPredicted RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 FOXN1O15353 648 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 STX7O15400 261 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 THAP12O43422 761 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 SPOPO43791 374 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ATE1O95260 518 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ARIH2O95376 493 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 MMP1P03956 469 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 DLDP09622 509 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ACADMP11310 421 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 FCGR1AP12314 374 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 XRCC5P13010 732 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ENO3P13929 434 aaPredicted RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 CYP11B1P15538 503 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 YBX3P16989 372 aaKnown RBP eCLIP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PROZP22891 400 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 CHMP24386 653 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 CCND2P30279 289 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 GARSP41250 739 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PTGIRP43119 386 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 BTDP43251 543 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 SERPINH1P50454 418 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 TPMTP51580 245 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 HSD17B7P56937 341 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 RAB25P57735 213 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 UBE2IP63279 158 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 UBE3AQ05086 875 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 SSRP1Q08945 709 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 CCNIQ14094 377 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 GALEQ14376 348 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 FASTKD3Q14CZ7 662 aaKnown RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 NCF4Q15080 339 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 GTDC1Q4AE62 458 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 BRDTQ58F21 947 aaPredicted RBP6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PITRM1Q5JRX3 1037 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 SNAP47Q5SQN1 464 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 C6orf52Q5T4I8 152 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 ZBTB37Q5TC79 503 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PXDC1Q5TGL8 231 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 AADACL4Q5VUY2 407 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 LPCAT4Q643R3 524 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 HGSNATQ68CP4 663 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 MFSD6Q6ZSS7 791 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 C16orf86Q6ZW13 317 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PLEKHM3Q6ZWE6 761 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 STXBP4Q6ZWJ1 553 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PRSS48Q7RTY5 328 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 KCNK18Q7Z418 384 aa6.4□□□□□ -1.38
PTPN9-204ENST00000564970 PRSS42Q7Z5A4 293 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms