RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SYNE3Q6ZMZ3 975 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 MEPCEQ7L2J0 689 aaKnown RBP5.29□□□□□ -1.56
UBR1-205ENST00000564540 MYLK4Q86YV6 388 aaPredicted RBP5.29□□□□□ -1.56
UBR1-205ENST00000564540 CACNA2D3Q8IZS8 1091 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 VPS52Q8N1B4 723 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 SLC25A41Q8N5S1 370 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 CMASQ8NFW8 434 aaPredicted RBP5.29□□□□□ -1.56
UBR1-205ENST00000564540 CPT1BQ92523 772 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 KCNJ9Q92806 393 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 PNRC2Q9NPJ4 139 aaKnown RBP5.29□□□□□ -1.56
UBR1-205ENST00000564540 TBC1D14Q9P2M4 693 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 GRHPRQ9UBQ7 328 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 INSL5Q9Y5Q6 135 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 EVPLQ92817 2033 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 TRBV5-7A0A0A0MS05 114 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 LCKP06239 509 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 HOXB9P17482 250 aaPredicted RBP5.28□□□□□ -1.56
UBR1-205ENST00000564540 CDC25AP30304 524 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 PGGT1BP53609 377 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 POLE2P56282 527 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 PDCLQ13371 301 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 GPR162Q16538 588 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 TUBB8Q3ZCM7 444 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 CCDC38Q502W7 563 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 DGAT2L7PQ6IED9 249 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 MTFR2Q6P444 385 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 PARM1Q6UWI2 310 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 C7orf57Q8NEG2 295 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 OTUD7AQ8TE49 926 aaPredicted RBP5.28□□□□□ -1.56
UBR1-205ENST00000564540 OIT3Q8WWZ8 545 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 ARRDC3Q96B67 414 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 TRAPPC9Q96Q05 1148 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 ISCUQ9H1K1 167 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 MYLK2Q9H1R3 596 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 Q9N2J8 555 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 NDUFAF4Q9P032 175 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 SLC25A13Q9UJS0 675 aa5.28□□□□□ -1.56
UBR1-205ENST00000564540 RPS10-NUDT3A0A1W2PQS6 291 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 HMX3A6NHT5 357 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 NPIPB13A6NJU9 1138 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 NPIPB5A8MRT5 1133 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 NPIPB4C9JG80 1138 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 KLKB1P03952 638 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 PKMP14618 531 aaKnown RBP5.27□□□□□ -1.57
UBR1-205ENST00000564540 HOXB6P17509 224 aaKnown RBP5.27□□□□□ -1.57
UBR1-205ENST00000564540 TYK2P29597 1187 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 TNFSF8P32971 234 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 SLC16A2P36021 539 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 CHAF1AQ13111 956 aaPredicted RBP5.27□□□□□ -1.57
UBR1-205ENST00000564540 BLMHQ13867 455 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 DCTN1Q14203 1278 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 ERV3-1Q14264 604 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 Q5PR19 223 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 TANGO2Q6ICL3 276 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 KIAA1161Q6NSJ0 714 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 CRELD2Q6UXH1 353 aaPredicted RBP5.27□□□□□ -1.57
UBR1-205ENST00000564540 SLC16A12Q6ZSM3 486 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 C2CD4CQ8TF44 421 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 PIGSQ96S52 555 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 TRIM31Q9BZY9 425 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 CLPBQ9H078 707 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 TMEM248Q9NWD8 314 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 BAG5Q9UL15 447 aa5.27□□□□□ -1.57
UBR1-205ENST00000564540 FAM90A20PA6NIJ5 464 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 H0Y3Z8 333 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 GTPBP1O00178 669 aaKnown RBP5.26□□□□□ -1.57
UBR1-205ENST00000564540 SPTLC2O15270 562 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 CYP2J2P51589 502 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 PRKAA2P54646 552 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 TMPRSS3P57727 454 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 ALKBH1Q13686 389 aaKnown RBP5.26□□□□□ -1.57
UBR1-205ENST00000564540 TIGD6Q17RP2 521 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 UBAP2Q5T6F2 1119 aaKnown RBP5.26□□□□□ -1.57
UBR1-205ENST00000564540 FAM171A1Q5VUB5 890 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 AAGABQ6PD74 315 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 CCDC174Q6PII3 467 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 Q6ZTK2 550 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 SYT13Q7L8C5 426 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 RASGRP2Q7LDG7 609 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 FAM217AQ8IXS0 508 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 LRRC57Q8N9N7 239 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 ENGASEQ8NFI3 743 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 URB1-AS1Q96HZ7 61 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 ZNF479Q96JC4 524 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 WDR77Q9BQA1 342 aaPredicted RBP5.26□□□□□ -1.57
UBR1-205ENST00000564540 ZPBPQ9BS86 351 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 DDX23Q9BUQ8 820 aaKnown RBP5.26□□□□□ -1.57
UBR1-205ENST00000564540 POLDIP3Q9BY77 421 aaKnown RBP5.26□□□□□ -1.57
UBR1-205ENST00000564540 HIPK3Q9H422 1215 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 ACTR5Q9H9F9 607 aaPredicted RBP5.26□□□□□ -1.57
UBR1-205ENST00000564540 SLC22A11Q9NSA0 550 aa5.26□□□□□ -1.57
UBR1-205ENST00000564540 GAGE12JA6NER3 117 aa5.25□□□□□ -1.57
UBR1-205ENST00000564540 BECN2A8MW95 431 aa5.25□□□□□ -1.57
UBR1-205ENST00000564540 ACP5P13686 325 aa5.25□□□□□ -1.57
UBR1-205ENST00000564540 CHN1P15882 459 aa5.25□□□□□ -1.57
UBR1-205ENST00000564540 RFX2P48378 723 aa5.25□□□□□ -1.57
UBR1-205ENST00000564540 RFX5P48382 616 aaPredicted RBP5.25□□□□□ -1.57
UBR1-205ENST00000564540 OAZ1P54368 228 aa5.25□□□□□ -1.57
UBR1-205ENST00000564540 TRAF1Q13077 416 aa5.25□□□□□ -1.57
UBR1-205ENST00000564540 MORC3Q14149 939 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms