RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CCNB1P14635 433 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 GJA1P17302 382 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 SLCO1A2P46721 670 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 LONRF1Q17RB8 773 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 PPM1LQ5SGD2 360 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 LRRC49Q8IUZ0 686 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 CORO1BQ9BR76 489 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 DONSONQ9NYP3 566 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 BCCIPQ9P287 314 aaKnown RBP eCLIP18.46■□□□□ 0.55
COMMD4-208ENST00000563220 IPO11Q9UI26 975 aaKnown RBP18.46■□□□□ 0.55
COMMD4-208ENST00000563220 TEX264Q9Y6I9 313 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 CHD7Q9P2D1 2997 aa18.46■□□□□ 0.55
COMMD4-208ENST00000563220 RASGRF2O14827 1237 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 GREM1O60565 184 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 RFPL2O75678 378 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 SSTR1P30872 391 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 MAGEA3P43357 314 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 LMAN1P49257 510 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 IFI35P80217 286 aaPredicted RBP18.46■□□□□ 0.54
COMMD4-208ENST00000563220 SMAD3P84022 425 aaKnown RBP18.46■□□□□ 0.54
COMMD4-208ENST00000563220 ELMOD1Q8N336 334 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 MAB21L3Q8N8X9 362 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 MRPS31Q92665 395 aaKnown RBP18.46■□□□□ 0.54
COMMD4-208ENST00000563220 PRICKLE1Q96MT3 831 aaPredicted RBP18.46■□□□□ 0.54
COMMD4-208ENST00000563220 IL12RB2Q99665 862 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 ROPN1BQ9BZX4 212 aaPredicted RBP18.46■□□□□ 0.54
COMMD4-208ENST00000563220 ATXN3LQ9H3M9 355 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 VPS37BQ9H9H4 285 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 ROPN1Q9HAT0 212 aaPredicted RBP18.46■□□□□ 0.54
COMMD4-208ENST00000563220 EIF2B3Q9NR50 452 aaKnown RBP18.46■□□□□ 0.54
COMMD4-208ENST00000563220 HCFC1R1Q9NWW0 138 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 RSPH14Q9UHP6 348 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 CHMP2BQ9UQN3 213 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 YBX2Q9Y2T7 364 aaKnown RBP18.46■□□□□ 0.54
COMMD4-208ENST00000563220 CPQQ9Y646 472 aa18.46■□□□□ 0.54
COMMD4-208ENST00000563220 ZFP37Q9Y6Q3 630 aaPredicted RBP18.46■□□□□ 0.54
COMMD4-208ENST00000563220 A0A1W2PRU2 124 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 LPXNO60711 386 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 CLASP2O75122 1294 aaKnown RBP18.45■□□□□ 0.54
COMMD4-208ENST00000563220 PEX11BO96011 259 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 NFKB1P19838 968 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 OR1E1P30953 314 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 SGSHP51688 502 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 RPS24P62847 133 aaKnown RBP18.45■□□□□ 0.54
COMMD4-208ENST00000563220 CDK16Q00536 496 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 SKIDA1Q1XH10 827 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 CCDC38Q502W7 563 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 ADGRF1Q5T601 910 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 AGBL2Q5U5Z8 902 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 TGS1Q96RS0 853 aaKnown RBP18.45■□□□□ 0.54
COMMD4-208ENST00000563220 GBA3Q9H227 469 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 MAN1C1Q9NR34 630 aa18.45■□□□□ 0.54
COMMD4-208ENST00000563220 A0A087WUV0 522 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-208ENST00000563220 HMGB1P1B2RPK0 211 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-208ENST00000563220 H3BNC9 293 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 J3KR12 359 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 SCAMP3O14828 347 aaKnown RBP18.44■□□□□ 0.54
COMMD4-208ENST00000563220 TCEA3O75764 348 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 MYL4P12829 197 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 EPCAMP16422 314 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 PBX2P40425 430 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 CCR2P41597 374 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 OLIG2Q13516 323 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 SPARCL1Q14515 664 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 STXBP5Q5T5C0 1151 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 C6orf118Q5T5N4 469 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 C3orf62Q6ZUJ4 267 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 OTOP3Q7RTS5 596 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 PALM2Q8IXS6 379 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 SIGLEC10Q96LC7 697 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 MLPHQ9BV36 600 aaPredicted RBP18.44■□□□□ 0.54
COMMD4-208ENST00000563220 NOVA2Q9UNW9 492 aaKnown RBP18.44■□□□□ 0.54
COMMD4-208ENST00000563220 ANAPC1Q9H1A4 1944 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 MYO7AQ13402 2215 aa18.44■□□□□ 0.54
COMMD4-208ENST00000563220 ARHGAP42A6NI28 874 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 PER2O15055 1255 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 CACNG3O60359 315 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 RAMP2O60895 175 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 MAPKAPK2P49137 400 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 ERVK-21P61565 698 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 GPM6BQ13491 265 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 STAT4Q14765 748 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 POLD3Q15054 466 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-208ENST00000563220 KCTD11Q693B1 232 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 ITPRIPL1Q6GPH6 555 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 TIGD7Q6NT04 549 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-208ENST00000563220 MPP5Q8N3R9 675 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 ATP11CQ8NB49 1132 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 MAML1Q92585 1016 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 PGM2Q96G03 612 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 CERS4Q9HA82 394 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 ASAH2Q9NR71 780 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 STOML2Q9UJZ1 356 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 CHD9Q3L8U1 2897 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 TSPAN3O60637 253 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 CDC25CP30307 473 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 ACVRL1P37023 503 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 CDH4P55283 916 aa18.43■□□□□ 0.54
COMMD4-208ENST00000563220 SARNPP82979 210 aaKnown RBP18.43■□□□□ 0.54
COMMD4-208ENST00000563220 LRRC8BQ6P9F7 803 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms