RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 G3BP1Q13283 466 aaKnown RBP eCLIP6.12□□□□□ -1.43
LINC00557-201ENST00000563184 DAZAP2Q15038 168 aaPredicted RBP6.12□□□□□ -1.43
LINC00557-201ENST00000563184 AP5B1Q2VPB7 878 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 SUPT20HL1Q3ZLR7 823 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 UBAP2Q5T6F2 1119 aaKnown RBP6.12□□□□□ -1.43
LINC00557-201ENST00000563184 NAPEPLDQ6IQ20 393 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 KLBQ86Z14 1044 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 TMEM217Q8N7C4 229 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 BCAS4Q8TDM0 211 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 ZBTB10Q96DT7 871 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 SEC62Q99442 399 aaKnown RBP6.12□□□□□ -1.43
LINC00557-201ENST00000563184 FAM118BQ9BPY3 351 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 SCNM1Q9BWG6 230 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 AGXT2Q9BYV1 514 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 MROH8Q9H579 483 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 ANAPC4Q9UJX5 808 aa6.12□□□□□ -1.43
LINC00557-201ENST00000563184 J3KRW8 73 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 CCNT1O60563 726 aaKnown RBP6.11□□□□□ -1.43
LINC00557-201ENST00000563184 PSMC2P35998 433 aaKnown RBP6.11□□□□□ -1.43
LINC00557-201ENST00000563184 ARHGAP25P42331 645 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 SLC12A2P55011 1212 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 KIAA1614Q5VZ46 1190 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 UBE2Q1Q7Z7E8 422 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 ST8SIA4Q92187 359 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 RRP36Q96EU6 259 aaKnown RBP6.11□□□□□ -1.43
LINC00557-201ENST00000563184 MPP4Q96JB8 637 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 SEMA4CQ9C0C4 833 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 MAF1Q9H063 256 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 LMAN2LQ9H0V9 348 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 TBX20Q9UMR3 447 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 TNFSF13BQ9Y275 285 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 TMEM98Q9Y2Y6 226 aa6.11□□□□□ -1.43
LINC00557-201ENST00000563184 USP12O75317 370 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 WDHD1O75717 1129 aaPredicted RBP6.1□□□□□ -1.43
LINC00557-201ENST00000563184 ATP1A3P13637 1013 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 GJC1P36383 396 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 PGM1P36871 562 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 NANOS3P60323 173 aaKnown RBP6.1□□□□□ -1.43
LINC00557-201ENST00000563184 GALNT2Q10471 571 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 TBL3Q12788 808 aaKnown RBP6.1□□□□□ -1.43
LINC00557-201ENST00000563184 TDGQ13569 410 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 IL13RA2Q14627 380 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 VWA5B1Q5TIE3 1220 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 SLC18B1Q6NT16 456 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 GJB7Q6PEY0 223 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 LRRC8DQ7L1W4 858 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 TEX19Q8NA77 164 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 SETD9Q8NE22 299 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 NCSTNQ92542 709 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 ELP4Q96EB1 424 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 SIGLEC11Q96RL6 698 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 FUZQ9BT04 418 aa6.1□□□□□ -1.43
LINC00557-201ENST00000563184 CCDC196A0A1B0GTZ2 297 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 NEURL1O76050 574 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 CELA2AP08217 269 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 CD63P08962 238 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 IFIT1P09914 478 aaKnown RBP6.09□□□□□ -1.43
LINC00557-201ENST00000563184 CD72P21854 359 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 HOXD9P28356 352 aaPredicted RBP6.09□□□□□ -1.43
LINC00557-201ENST00000563184 STAT1P42224 750 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 PTPN9P43378 593 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 MPP1Q00013 466 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 GHRHRQ02643 423 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 STIM1Q13586 685 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 SLC4A8Q2Y0W8 1093 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 SLC9C1Q4G0N8 1177 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 AADACL2Q6P093 401 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 YTHDF3Q7Z739 585 aaKnown RBP6.09□□□□□ -1.43
LINC00557-201ENST00000563184 NEK8Q86SG6 692 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 SCAIQ8N9R8 606 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 TBC1D22AQ8WUA7 517 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC00557-201ENST00000563184 CADM1Q9BY67 442 aaKnown RBP6.09□□□□□ -1.43
LINC00557-201ENST00000563184 PAIP1Q9H074 479 aaKnown RBP6.09□□□□□ -1.43
LINC00557-201ENST00000563184 ZNF304Q9HCX3 659 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 IPO11Q9UI26 975 aaKnown RBP6.09□□□□□ -1.43
LINC00557-201ENST00000563184 SUFUQ9UMX1 484 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 SLC8A2Q9UPR5 921 aa6.09□□□□□ -1.43
LINC00557-201ENST00000563184 E5RJQ4 531 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 MSI1O43347 362 aaKnown RBP6.08□□□□□ -1.44
LINC00557-201ENST00000563184 NFATC1O95644 943 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 CTSAP10619 480 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 FCGR2AP12318 317 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 PRKCHP24723 683 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 CCT4P50991 539 aaKnown RBP6.08□□□□□ -1.44
LINC00557-201ENST00000563184 GOLGA8FQ08AF8 430 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 GALNT3Q14435 633 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 BAK1Q16611 211 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 NFIL3Q16649 462 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 PLK5Q496M5 336 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 FBXO43Q4G163 708 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 MIDNQ504T8 468 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 LRIG3Q6UXM1 1119 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 FAM57BQ71RH2 274 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 DNAJC10Q8IXB1 793 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 ADGRF4Q8IZF3 695 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 TSPYL6Q8N831 410 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 RFWD2Q8NHY2 731 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 RUFY2Q8WXA3 655 aa6.08□□□□□ -1.44
LINC00557-201ENST00000563184 NPLQ9BXD5 320 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms