RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 AFF3P51826 1226 aaKnown RBP17.31■□□□□ 0.36
CLK3-210ENST00000563112 HNRNPDQ14103 355 aaKnown RBP17.31■□□□□ 0.36
CLK3-210ENST00000563112 NCAPHQ15003 741 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 ARL13BQ3SXY8 428 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 OR2I1PQ8NGU4 316 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 SLC30A5Q8TAD4 765 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 BIRC7Q96CA5 298 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 ALG14Q96F25 216 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 CNTNAP3BQ96NU0 1288 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 HAPLN3Q96S86 360 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 FAM129BQ96TA1 746 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 C11orf70Q9BRQ4 267 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 CNTNAP3Q9BZ76 1288 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 OSGEPQ9NPF4 335 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 ANLNQ9NQW6 1124 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 SEPT11Q9NVA2 429 aaKnown RBP17.31■□□□□ 0.36
CLK3-210ENST00000563112 EPG5Q9HCE0 2579 aa17.31■□□□□ 0.36
CLK3-210ENST00000563112 PCNX2A6NKB5 2137 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 KNL1Q8NG31 2342 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 DRGXA6NNA5 263 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 SMTNL1A8MU46 457 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 E9PAM4 449 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 SRGAP2O75044 1071 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 CER1O95813 267 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 GOT1P17174 413 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 CD27P26842 260 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 ATP11AP98196 1134 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 DLG2Q15700 870 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 ANO6Q4KMQ2 910 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 C6orf118Q5T5N4 469 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 FAM46CQ5VWP2 391 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 KIAA0895LQ68EN5 471 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 PIP4P1Q86T03 277 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 SETD3Q86TU7 594 aaPredicted RBP17.3■□□□□ 0.36
CLK3-210ENST00000563112 FAM131BQ86XD5 332 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 EMC1Q8N766 993 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 OR8D1Q8WZ84 308 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 C2orf49Q9BVC5 232 aaPredicted RBP17.3■□□□□ 0.36
CLK3-210ENST00000563112 NEUROG2Q9H2A3 272 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 ADAM22Q9P0K1 906 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 TMEM63CQ9P1W3 806 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 ADAMTS1Q9UHI8 967 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 OR51B4Q9Y5P0 310 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 SNX10Q9Y5X0 201 aa17.3■□□□□ 0.36
CLK3-210ENST00000563112 ATP9BO43861 1147 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 ENDOD1O94919 500 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 CALB1P05937 261 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 UNGP13051 313 aaPredicted RBP17.29■□□□□ 0.36
CLK3-210ENST00000563112 CD59P13987 128 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 OR1E1P30953 314 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 CSNK1EP49674 416 aaKnown RBP17.29■□□□□ 0.36
CLK3-210ENST00000563112 GALCP54803 685 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 ALFQ53S48 1182 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 TRNP1Q6NT89 227 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 BNIPLQ7Z465 357 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 PHLDB2Q86SQ0 1253 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 ZNF683Q8IZ20 524 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 OR52K2Q8NGK3 314 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 OR2T34Q8NGX1 318 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 C1orf216Q8TAB5 229 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 FRS2Q8WU20 508 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 RXFP2Q8WXD0 754 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 BPIFA3Q9BQP9 254 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 SELENOOQ9BVL4 669 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 GAREM1Q9H706 876 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 TMPRSS4Q9NRS4 437 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 MPP6Q9NZW5 540 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 FARP1Q9Y4F1 1045 aaPredicted RBP17.29■□□□□ 0.36
CLK3-210ENST00000563112 PCDHB9Q9Y5E1 797 aa17.29■□□□□ 0.36
CLK3-210ENST00000563112 IGLV3-10A0A075B6K4 115 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 A0A1B0GVT2 93 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 C1QTNF3-AMACRE9PGA6 284 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 I6L893 689 aaPredicted RBP17.28■□□□□ 0.36
CLK3-210ENST00000563112 ALOX15BO15296 676 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 GJB3O75712 270 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 KRT3P12035 628 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 ATP1A3P13637 1013 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 VAV1P15498 845 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 FERP16591 822 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 GRIA4P48058 902 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 SHC2P98077 582 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 FOXC1Q12948 553 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 CDO1Q16878 200 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 CLEC16AQ2KHT3 1053 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 FILIP1LQ4L180 1135 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 NCEH1Q6PIU2 408 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 APTXQ7Z2E3 356 aaKnown RBP17.28■□□□□ 0.36
CLK3-210ENST00000563112 TFAP2DQ7Z6R9 452 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 ADAT2Q7Z6V5 191 aaKnown RBP17.28■□□□□ 0.36
CLK3-210ENST00000563112 PHF13Q86YI8 300 aaPredicted RBP17.28■□□□□ 0.36
CLK3-210ENST00000563112 SH2D3CQ8N5H7 860 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 ATP11CQ8NB49 1132 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 OR14C36Q8NHC7 312 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 SKA1Q96BD8 255 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 CCDC114Q96M63 670 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 PCDHB18PQ96TA0 734 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 AGPAT1Q99943 283 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 ZYG11BQ9C0D3 744 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 HSD3B7Q9H2F3 369 aa17.28■□□□□ 0.36
CLK3-210ENST00000563112 TM9SF3Q9HD45 589 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms