RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 APCDD1Q8J025 514 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 C17orf53Q8N3J3 647 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-207ENST00000563109 SYNPOQ8N3V7 929 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 DCAF4L2Q8NA75 395 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 OR7D4Q8NG98 312 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 OR52K2Q8NGK3 314 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 CELF6Q96J87 481 aaKnown RBP19.28■□□□□ 0.68
RAB40C-207ENST00000563109 ETNK2Q9NVF9 386 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 SLC25A13Q9UJS0 675 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 SIT1Q9Y3P8 196 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 CHD5Q8TDI0 1954 aa19.28■□□□□ 0.68
RAB40C-207ENST00000563109 hCG_1818297A0A087WSY0 165 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 A0A0D9SEW6 157 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 RASA4BC9J798 803 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 K7EQS6 105 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 RASA4O43374 803 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 CHRNB1P11230 501 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 PTPN7P35236 360 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 GNG11P61952 73 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 PAFAH1B3Q15102 231 aaKnown RBP19.27■□□□□ 0.68
RAB40C-207ENST00000563109 TAZQ16635 292 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 NCBP2-AS2Q69YL0 99 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 TRMT11Q7Z4G4 463 aaKnown RBP19.27■□□□□ 0.68
RAB40C-207ENST00000563109 SFTPA1Q8IWL2 248 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 CCDC105Q8IYK2 499 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 NPWQ8N729 165 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 PQLC3Q8N755 202 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 KCNV2Q8TDN2 545 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 ARHGEF2Q92974 986 aaKnown RBP19.27■□□□□ 0.68
RAB40C-207ENST00000563109 TTC17Q96AE7 1141 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 LRRC19Q9H756 370 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 LMAN1LQ9HAT1 526 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 RBM12Q9NTZ6 932 aaKnown RBP19.27■□□□□ 0.68
RAB40C-207ENST00000563109 INTS6Q9UL03 887 aaKnown RBP19.27■□□□□ 0.68
RAB40C-207ENST00000563109 PLA2G4CQ9UP65 541 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 STARD13Q9Y3M8 1113 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 MTF2Q9Y483 593 aaPredicted RBP19.27■□□□□ 0.68
RAB40C-207ENST00000563109 OR51B4Q9Y5P0 310 aa19.27■□□□□ 0.68
RAB40C-207ENST00000563109 CBX4O00257 560 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 DFFAO00273 331 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 KCNK3O14649 394 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 NPC1O15118 1278 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 MFSD11O43934 449 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 RNF40O75150 1001 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 PDGFBP01127 241 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-207ENST00000563109 DLDP09622 509 aaKnown RBP19.26■□□□□ 0.67
RAB40C-207ENST00000563109 PYGMP11217 842 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 KRT10P13645 584 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 ACVRL1P37023 503 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 MAGEA9P43362 315 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 NUMBP49757 651 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 ST8SIA6P61647 398 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 DYNLT1P63172 113 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 MRPS21P82921 87 aaKnown RBP19.26■□□□□ 0.67
RAB40C-207ENST00000563109 ECT2LQ008S8 904 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 ZNF211Q13398 564 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-207ENST00000563109 CCDC181Q5TID7 509 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 TMEM215Q68D42 235 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 CWF19L1Q69YN2 538 aaKnown RBP19.26■□□□□ 0.67
RAB40C-207ENST00000563109 SLC9A4Q6AI14 798 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 ZNF687Q8N1G0 1237 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 ZNF513Q8N8E2 541 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-207ENST00000563109 EZH1Q92800 747 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-207ENST00000563109 ACDQ96AP0 544 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 ALG14Q96F25 216 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 HMCESQ96FZ2 354 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 OSBPL8Q9BZF1 889 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 CARD9Q9H257 536 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 NOL6Q9H6R4 1146 aaKnown RBP19.26■□□□□ 0.67
RAB40C-207ENST00000563109 EFR3BQ9Y2G0 817 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 MFHAS1Q9Y4C4 1052 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 NCOR1O75376 2440 aa19.26■□□□□ 0.67
RAB40C-207ENST00000563109 NYNRINQ9P2P1 1898 aaKnown RBP19.25■□□□□ 0.67
RAB40C-207ENST00000563109 MUC22E2RYF6 1773 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-207ENST00000563109 CST8O60676 142 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 TGM2P21980 687 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 TIE1P35590 1138 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 NNMTP40261 264 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 GEMIN4P57678 1058 aaKnown RBP19.25■□□□□ 0.67
RAB40C-207ENST00000563109 LLGL1Q15334 1064 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 HSF5Q4G112 596 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-207ENST00000563109 FNDC3BQ53EP0 1204 aaKnown RBP19.25■□□□□ 0.67
RAB40C-207ENST00000563109 C2orf27AQ580R0 203 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 AFMIDQ63HM1 303 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 EGFLAMQ63HQ2 1017 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 RETSATQ6NUM9 610 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 ARHGAP12Q8IWW6 846 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 ATPAF2Q8N5M1 289 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 CYB5D2Q8WUJ1 264 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 SORCS1Q8WY21 1168 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 PBXIP1Q96AQ6 731 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 PSMB7Q99436 277 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 TLR10Q9BXR5 811 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 ACE2Q9BYF1 805 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-207ENST00000563109 SLC39A8Q9C0K1 460 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 KLC2Q9H0B6 622 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 EPHX3Q9H6B9 360 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 SP110Q9HB58 689 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 VPS51Q9UID3 782 aa19.25■□□□□ 0.67
RAB40C-207ENST00000563109 SLC8A2Q9UPR5 921 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms