RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 DNAJC7Q99615 494 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 CNPY3Q9BT09 278 aa17.05■□□□□ 0.32
CDT1-202ENST00000562747 INTS6Q9UL03 887 aaKnown RBP17.05■□□□□ 0.32
CDT1-202ENST00000562747 IGLV3-10A0A075B6K4 115 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.04■□□□□ 0.32
CDT1-202ENST00000562747 SPAARA0A1B0GVQ0 90 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 DRGXA6NNA5 263 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 E9PAM4 449 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 CCP110O43303 1012 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 PLEKP08567 350 aaPredicted RBP17.04■□□□□ 0.32
CDT1-202ENST00000562747 GABRG2P18507 467 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 ADRA1BP35368 520 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 NRG1Q02297 640 aaPredicted RBP17.04■□□□□ 0.32
CDT1-202ENST00000562747 ZNF177Q13360 481 aaPredicted RBP17.04■□□□□ 0.32
CDT1-202ENST00000562747 PTPRNQ16849 979 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 PLEKHG6Q3KR16 790 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 RAB6CQ53S08 254 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 PITRM1Q5JRX3 1037 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 CXorf57Q6NSI4 855 aaKnown RBP17.04■□□□□ 0.32
CDT1-202ENST00000562747 SLC23A3Q6PIS1 610 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 SERPINA13PQ6UXR4 307 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 PIP4P1Q86T03 277 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 DEFB119Q8N690 84 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 CYB5D2Q8WUJ1 264 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 NTAN1Q96AB6 310 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 ZNF653Q96CK0 615 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 NUSAP1Q9BXS6 441 aaKnown RBP17.04■□□□□ 0.32
CDT1-202ENST00000562747 TRIM5Q9C035 493 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 RAB6CQ9H0N0 254 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 OSBPL2Q9H1P3 480 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 TMEM245Q9H330 911 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 MRPL47Q9HD33 250 aaKnown RBP17.04■□□□□ 0.32
CDT1-202ENST00000562747 TMPRSS4Q9NRS4 437 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 ARHGAP20Q9P2F6 1191 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 CNOT8Q9UFF9 292 aaKnown RBP17.04■□□□□ 0.32
CDT1-202ENST00000562747 PILRBQ9UKJ0 227 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 KLK13Q9UKR3 277 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 RAD54BQ9Y620 910 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 SCINQ9Y6U3 715 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 CACNA1EQ15878 2313 aa17.04■□□□□ 0.32
CDT1-202ENST00000562747 MUC22E2RYF6 1773 aaPredicted RBP17.04■□□□□ 0.32
CDT1-202ENST00000562747 ATMINO43313 823 aaPredicted RBP17.03■□□□□ 0.32
CDT1-202ENST00000562747 CSKP41240 450 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 IRAK1P51617 712 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 PLK1P53350 603 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 AIF1P55008 147 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 BYSLQ13895 437 aaKnown RBP17.03■□□□□ 0.32
CDT1-202ENST00000562747 FNDC3BQ53EP0 1204 aaKnown RBP17.03■□□□□ 0.32
CDT1-202ENST00000562747 DNAAF5Q86Y56 855 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 PGBD3Q8N328 593 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 KDM1BQ8NB78 822 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 OR2I1PQ8NGU4 316 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 FNIP1Q8TF40 1166 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 ERLEC1Q96DZ1 483 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 RBSNQ9H1K0 784 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 ZNHIT6Q9NWK9 470 aaKnown RBP17.03■□□□□ 0.32
CDT1-202ENST00000562747 PPARGC1AQ9UBK2 798 aaKnown RBP17.03■□□□□ 0.32
CDT1-202ENST00000562747 TBC1D30Q9Y2I9 924 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 SNX10Q9Y5X0 201 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 BAHCC1Q9P281 2608 aa17.03■□□□□ 0.32
CDT1-202ENST00000562747 A0A087X0T9 212 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 TMEM8BA6NDV4 472 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 TMEM191CA6NGB0 347 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 SRRM3A6NNA2 597 aaPredicted RBP17.02■□□□□ 0.32
CDT1-202ENST00000562747 SYNCRIPO60506 623 aaKnown RBP17.02■□□□□ 0.32
CDT1-202ENST00000562747 MFAP3LO75121 409 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 CNTN5O94779 1100 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 CFIP05156 583 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 EPHX1P07099 455 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 SRPRAP08240 638 aaKnown RBP17.02■□□□□ 0.32
CDT1-202ENST00000562747 FAM228BP0C875 321 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 PRKCHP24723 683 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 ST8SIA6P61647 398 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 FAM193AP78312 1265 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 SULT2A1Q06520 285 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 SCAPQ12770 1279 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 SEMA3BQ13214 749 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 TSR1Q2NL82 804 aaKnown RBP17.02■□□□□ 0.32
CDT1-202ENST00000562747 ARTNQ5T4W7 220 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 ALKBH5Q6P6C2 394 aaKnown RBP17.02■□□□□ 0.32
CDT1-202ENST00000562747 TMC6Q7Z403 805 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 ZCCHC14Q8WYQ9 949 aaKnown RBP17.02■□□□□ 0.32
CDT1-202ENST00000562747 RETREG1Q9H6L5 497 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 ABHD10Q9NUJ1 306 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 OR12D3Q9UGF7 316 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 GON4LQ3T8J9 2241 aa17.02■□□□□ 0.32
CDT1-202ENST00000562747 CKAP5Q14008 2032 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 SSU72P8A0A1W2PR75 194 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 AP5Z1O43299 807 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 SRGAP2O75044 1071 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 NDUFV2P19404 249 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 PSMA2P25787 234 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 MZF1P28698 734 aaPredicted RBP17.01■□□□□ 0.31
CDT1-202ENST00000562747 SIM1P81133 766 aaPredicted RBP17.01■□□□□ 0.31
CDT1-202ENST00000562747 ECT2LQ008S8 904 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 OGDHQ02218 1023 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 RPL6Q02878 288 aaKnown RBP17.01■□□□□ 0.31
CDT1-202ENST00000562747 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
CDT1-202ENST00000562747 CAMK2GQ13555 558 aaPredicted RBP17.01■□□□□ 0.31
CDT1-202ENST00000562747 ALFQ53S48 1182 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms