RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ABHD11Q8NFV4 315 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 CHURC1Q8WUH1 139 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 ZNF274Q96GC6 653 aaPredicted RBP5.17□□□□□ -1.58
SMG1-206ENST00000562668 ERO1AQ96HE7 468 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 RITA1Q96K30 269 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 MRGPRX1Q96LB2 322 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 PIGSQ96S52 555 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 PAGR1Q9BTK6 254 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 SPZ1Q9BXG8 430 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 TEX13BQ9BXU2 312 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 PRSS22Q9GZN4 317 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 CXorf36Q9H7Y0 433 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 RAVER2Q9HCJ3 691 aaKnown RBP5.17□□□□□ -1.58
SMG1-206ENST00000562668 PDRG1Q9NUG6 133 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.17□□□□□ -1.58
SMG1-206ENST00000562668 FRMPD3Q5JV73 1810 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 ASTN1O14525 1302 aa5.17□□□□□ -1.58
SMG1-206ENST00000562668 BAZ2BQ9UIF8 2168 aaKnown RBP5.16□□□□□ -1.58
SMG1-206ENST00000562668 SMIM35A0A1B0GVV1 85 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 CCDC69A6NI79 296 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 hCG_1984214I3L0E3 225 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 ZBTB5O15062 677 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 ZBTB43O43298 467 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 PFKFB2O60825 505 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 ZBED4O75132 1171 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 USP1O94782 785 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 SLC25A27O95847 323 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 DLDP09622 509 aaKnown RBP5.16□□□□□ -1.58
SMG1-206ENST00000562668 HOXC6P09630 235 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 CALM1P0DP23 149 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 CALM2P0DP24 149 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 CALM3P0DP25 149 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 CYP2C9P11712 490 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 FDPSP14324 419 aaKnown RBP5.16□□□□□ -1.58
SMG1-206ENST00000562668 MAPK4P31152 587 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 ARHGAP25P42331 645 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 SLC11A2P49281 568 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 PRKCZQ05513 592 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 MYO1EQ12965 1108 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 ME3Q16798 604 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 ATAT1Q5SQI0 421 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 DEPDC1Q5TB30 811 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 SNRNP48Q6IEG0 339 aaKnown RBP5.16□□□□□ -1.58
SMG1-206ENST00000562668 CCDC174Q6PII3 467 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 CTU1Q7Z7A3 348 aaKnown RBP5.16□□□□□ -1.58
SMG1-206ENST00000562668 MICU3Q86XE3 530 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 OSCP1Q8WVF1 389 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 C5orf34Q96MH7 638 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 THAP7Q9BT49 309 aaPredicted RBP5.16□□□□□ -1.58
SMG1-206ENST00000562668 MROH8Q9H579 483 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 PDGFCQ9NRA1 345 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 AASDHPPTQ9NRN7 309 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 IP6K2Q9UHH9 426 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 MRPS17Q9Y2R5 130 aaKnown RBP5.16□□□□□ -1.58
SMG1-206ENST00000562668 CACNA1IQ9P0X4 2223 aa5.16□□□□□ -1.58
SMG1-206ENST00000562668 hCG_1642624A0A1W2PR95 340 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 SLC15A5A6NIM6 579 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 KCNU1A8MYU2 1149 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 MYO1CO00159 1063 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 TNPO2O14787 897 aaKnown RBP5.15□□□□□ -1.59
SMG1-206ENST00000562668 THP07101 528 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 IFNAR1P17181 557 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 MMP13P45452 471 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 METAP2P50579 478 aaKnown RBP eCLIP5.15□□□□□ -1.59
SMG1-206ENST00000562668 PPP2R5BQ15173 497 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 RABEP1Q15276 862 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 CCL14Q16627 93 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 TBC1D25Q3MII6 688 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 MAP3K21Q5TCX8 1036 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 FCRL6Q6DN72 434 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 MTHFD1LQ6UB35 978 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 ABRAQ8N0Z2 381 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 CPXCR1Q8N123 301 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 FAM133AQ8N9E0 248 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 CTCFLQ8NI51 663 aaPredicted RBP5.15□□□□□ -1.59
SMG1-206ENST00000562668 TRIB2Q92519 343 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 GTF3C6Q969F1 213 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 ZBTB9Q96C00 473 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 C1GALT1C1Q96EU7 318 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 SNX18Q96RF0 628 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 MESP1Q9BRJ9 268 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 LZTS2Q9BRK4 669 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 VAT1LQ9HCJ6 419 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 A1CFQ9NQ94 594 aaKnown RBP5.15□□□□□ -1.59
SMG1-206ENST00000562668 RNF146Q9NTX7 359 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 RBM28Q9NW13 759 aaKnown RBP5.15□□□□□ -1.59
SMG1-206ENST00000562668 CYP39A1Q9NYL5 469 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 COL20A1Q9P218 1284 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 ANKRD6Q9Y2G4 727 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 TRIM17Q9Y577 477 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 BRCA2P51587 3418 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 ABCB11O95342 1321 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 MCM3APO60318 1980 aa5.15□□□□□ -1.59
SMG1-206ENST00000562668 POC1B-GALNT4F8VUJ3 575 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 MEIS2O14770 477 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 PPEF2O14830 753 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 PRPF3O43395 683 aaKnown RBP5.14□□□□□ -1.59
SMG1-206ENST00000562668 STRNO43815 780 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 EDIL3O43854 480 aa5.14□□□□□ -1.59
SMG1-206ENST00000562668 ABLIM3O94929 683 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms