RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 FEZ2Q9UHY8 353 aaPredicted RBP23.06■■□□□ 1.28
SYNGR3-202ENST00000562045 FAM170BA6NMN3 283 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 RAD51CO43502 376 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 LRIG2O94898 1065 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 TACR2P21452 398 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 HOXD9P28356 352 aaPredicted RBP23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 IRAK1P51617 712 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 RPS24P62847 133 aaKnown RBP23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 DR1Q01658 176 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 OTUD4Q01804 1114 aaKnown RBP23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 DPYSQ14117 519 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 TTC27Q6P3X3 843 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 PJA1Q8NG27 643 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 DDI1Q8WTU0 396 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 STIM2Q9P246 746 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 KMT2EQ8IZD2 1858 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 TARSL2A2RTX5 802 aaKnown RBP23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 MAN2B1O00754 1011 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 LIASO43766 372 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 GPR37L1O60883 481 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 TULP3O75386 442 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 DCNP07585 359 aaKnown RBP23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 AMPD1P23109 780 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 KDSRQ06136 332 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 SNX1Q13596 522 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 BYSLQ13895 437 aaKnown RBP23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 TMEM196Q5HYL7 178 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 ASTLQ6HA08 431 aaPredicted RBP23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 BMP8AQ7Z5Y6 402 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 CHSY1Q86X52 802 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 LGI2Q8N0V4 545 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 GRK7Q8WTQ7 553 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 P2RY13Q9BPV8 354 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 FAM118BQ9BPY3 351 aa23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 SAE1Q9UBE0 346 aaPredicted RBP23.05■■□□□ 1.28
SYNGR3-202ENST00000562045 MCF2LO15068 1137 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 CACNG3O60359 315 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 EGFP01133 1207 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 PECAM1P16284 738 aaPredicted RBP23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 EPHB2P29323 1055 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 NR2C2P49116 596 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 MANEALQ5VSG8 457 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 NCBP2-AS2Q69YL0 99 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 CIR1Q86X95 450 aaPredicted RBP23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 ATL2Q8NHH9 583 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 SLC35B2Q8TB61 432 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 WFDC5Q8TCV5 224 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 SLCO2A1Q92959 643 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 NKD2Q969F2 451 aaPredicted RBP23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 IGSF8Q969P0 613 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 TMA16Q96EY4 203 aaKnown RBP23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 ANKZF1Q9H8Y5 726 aa23.04■■□□□ 1.28
SYNGR3-202ENST00000562045 CHRNB1P11230 501 aa23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 LMNB2Q03252 620 aa23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 AUHQ13825 339 aaKnown RBP23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 NOMO1Q15155 1222 aa23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 MPPE1Q53F39 396 aa23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 FBXL22Q6P050 247 aa23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 TMEM105Q8N8V8 129 aa23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 TBC1D31Q96DN5 1066 aa23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 MSANTD3Q96H12 275 aa23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 DNAJC17Q9NVM6 304 aaKnown RBP23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 DNPEPQ9ULA0 475 aa23.03■■□□□ 1.28
SYNGR3-202ENST00000562045 FAM187AA6NFU0 413 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 DCLK1O15075 740 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 TTI1O43156 1089 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 TBL1XO60907 577 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 ECEL1O95672 775 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 CISD3P0C7P0 127 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 ERCC2P18074 760 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 HOXC13P31276 330 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 KCNJ1P48048 391 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 MRPS25P82663 173 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 CCINQ13939 588 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 C1orf228Q6PIY5 440 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 TMCO3Q6UWJ1 677 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 LRRC31Q6UY01 552 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 BZW1Q7L1Q6 419 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 ZNF683Q8IZ20 524 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 FBXL6Q8N531 539 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 RUBCNQ92622 972 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 CCDC114Q96M63 670 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 EPC1Q9H2F5 836 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 FBXO10Q9UK96 956 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 VANGL2Q9ULK5 521 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 DRG1Q9Y295 367 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 SIT1Q9Y3P8 196 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 HEY1Q9Y5J3 304 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 DOCK4Q8N1I0 1966 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 E9PAM4 449 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 FGF10O15520 208 aaPredicted RBP23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 HEXIM1O94992 359 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 TUBBP07437 444 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 AOC1P19801 751 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 PAFAH1B3Q15102 231 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 OASLQ15646 514 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 TMEM31Q5JXX7 168 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 RWDD4Q6NW29 188 aaKnown RBP23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 NPNTQ6UXI9 565 aa23.02■■□□□ 1.28
SYNGR3-202ENST00000562045 CATSPERBQ9H7T0 1116 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms