RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 RNF103O00237 685 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 RNASEH1O60930 286 aaKnown RBP9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 TOP3BO95985 862 aaKnown RBP9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 F9P00740 461 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 SERPINC1P01008 464 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 SRPRAP08240 638 aaKnown RBP9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 SERPINF2P08697 491 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 KRT3P12035 628 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 GNSP15586 552 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 SPINK2P20155 84 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 TNFAIP3P21580 790 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 GPD1P21695 349 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 RRM1P23921 792 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 NNMTP40261 264 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 CSNK1EP49674 416 aaKnown RBP9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 CDH4P55283 916 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 GRIK2Q13002 908 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 IQCB1Q15051 598 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 E2F5Q15329 346 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 DLG2Q15700 870 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 CST6Q15828 149 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 TTC31Q49AM3 519 aaPredicted RBP9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 FILIP1LQ4L180 1135 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 PRAMEF14Q5SWL7 426 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 FAM72AQ5TYM5 149 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 TTC39BQ5VTQ0 682 aaPredicted RBP9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 FAM72DQ6L9T8 149 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 DNAJC24Q6P3W2 148 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 NCEH1Q6PIU2 408 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 WDR59Q6PJI9 974 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 LRSAM1Q6UWE0 723 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 LRRC31Q6UY01 552 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 TRIM72Q6ZMU5 477 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 FAM72BQ86X60 149 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 PYROXD2Q8N2H3 581 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 AADATQ8N5Z0 425 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 FAM172AQ8WUF8 416 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 CPLX3Q8WVH0 158 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 BAP1Q92560 729 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 FOXJ1Q92949 421 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 NT5C3BQ969T7 300 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 BIRC7Q96CA5 298 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 CAMK1GQ96NX5 476 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 MCEEQ96PE7 176 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 TNKS2Q9H2K2 1166 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 RRN3Q9NYV6 651 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 DNAI1Q9UI46 699 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 SARDHQ9UL12 918 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 NCKAP1Q9Y2A7 1128 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 OR51B4Q9Y5P0 310 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 LAMA1P25391 3075 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 C2CD4BA6NLJ0 364 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 DRGXA6NNA5 263 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 CBX4O00257 560 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 ARHGAP33O14559 1287 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 CCP110O43303 1012 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 SMAD6O43541 496 aaKnown RBP9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 RTN2O75298 545 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 CLDN11O75508 207 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 SRCP12931 536 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 FERP16591 822 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 OR1E1P30953 314 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 MAT2AP31153 395 aaKnown RBP9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 ACVRL1P37023 503 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 SCNN1AP37088 669 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 DNA2P51530 1060 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 HDAC4P56524 1084 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 RPL7AP62424 266 aaKnown RBP9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 FAM193AP78312 1265 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 IL9RQ01113 521 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 FOXK2Q01167 660 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 BNC1Q01954 994 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 OGDHQ02218 1023 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF252P-AS1Q0IIN9 211 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 FOXC1Q12948 553 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 SPDYCQ5MJ68 293 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 PEAR1Q5VY43 1037 aaPredicted RBP9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 KIAA0895LQ68EN5 471 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 MON1BQ7L1V2 547 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 IRF2BP2Q7Z5L9 587 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF354CQ86Y25 554 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 ATP11CQ8NB49 1132 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 CHST14Q8NCH0 376 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 OR14C36Q8NHC7 312 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 CEP76Q8TAP6 659 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 FRS2Q8WU20 508 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 PGAP3Q96FM1 320 aaPredicted RBP9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 SLC6A18Q96N87 628 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 BPIFA3Q9BQP9 254 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 HAUS4Q9H6D7 363 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 NDFIP2Q9NV92 336 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 GPATCH2LQ9NWQ4 482 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 VPS51Q9UID3 782 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 PCDH15Q96QU1 1955 aa9.72□□□□□ -0.85
NSMCE1-203ENST00000562039 TPRP12270 2363 aaKnown RBP9.71□□□□□ -0.85
NSMCE1-203ENST00000562039 A0A1B0GTW7 788 aa9.71□□□□□ -0.86
NSMCE1-203ENST00000562039 TARSL2A2RTX5 802 aaKnown RBP9.71□□□□□ -0.86
NSMCE1-203ENST00000562039 WNT9AO14904 365 aa9.71□□□□□ -0.86
NSMCE1-203ENST00000562039 BCAT2O15382 392 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms