RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 MGAT5BQ3V5L5 792 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 RTP2Q5QGT7 225 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 PIK3R6Q5UE93 754 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 RNF43Q68DV7 783 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 RNF19BQ6ZMZ0 732 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 RASSF3Q86WH2 238 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 TRIM42Q8IWZ5 723 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 ZNF683Q8IZ20 524 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 UMODL1-AS1Q8N2C9 162 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 ZNF276Q8N554 614 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 TTC9BQ8N6N2 239 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 GBP7Q8N8V2 638 aaPredicted RBP12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 OR52K1Q8NGK4 314 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 ZNF75CPQ92670 426 aaPredicted RBP12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 CERS2Q96G23 380 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 BTN2A3PQ96KV6 586 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 B3GALT6Q96L58 329 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 KLF6Q99612 283 aaPredicted RBP12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 SEPT5Q99719 369 aaPredicted RBP12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 TTLL2Q9BWV7 592 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 ZYG11BQ9C0D3 744 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 SLC39A8Q9C0K1 460 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 IL22Q9GZX6 179 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 GLOD4Q9HC38 313 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 HAUS2Q9NVX0 235 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 MTRRQ9UBK8 725 aa12.92□□□□□ -0.34
AC055717.2-201ENST00000561864 TTC3P53804 2025 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 IGLV3-10A0A075B6K4 115 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 FAM237BA0A1B0GVD1 139 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 GOLGA8RI6L899 631 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 USP1O94782 785 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 VNN2O95498 520 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 IL1BP01584 269 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 RFC2P35250 354 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 GEMP55040 296 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 ACTN3Q08043 901 aaPredicted RBP12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 CDH17Q12864 832 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 TAF10Q12962 218 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 MS4A13Q5J8X5 152 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 STXBP5Q5T5C0 1151 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 C1orf53Q5VUE5 145 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 FYB2Q5VWT5 728 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 SLC8B1Q6J4K2 584 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 CGB2Q6NT52 195 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 CNKSR3Q6P9H4 555 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 PACS1Q6VY07 963 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 SLC39A5Q6ZMH5 540 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 TRPM8Q7Z2W7 1104 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 C14orf80Q86SX3 495 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 TMEM135Q86UB9 458 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 CCDC117Q8IWD4 279 aaPredicted RBP12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 DNAAF3Q8N9W5 541 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 PDZD8Q8NEN9 1154 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 BCL7CQ8WUZ0 217 aaPredicted RBP12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 OVCA2Q8WZ82 227 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 SCLYQ96I15 445 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 SRPK1Q96SB4 655 aaKnown RBP12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 TMEM248Q9NWD8 314 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 MARCH2Q9P0N8 246 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 KLHL14Q9P2G3 628 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 SLC17A7Q9P2U7 560 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 HSFX1Q9UBD0 423 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 PHTF1Q9UMS5 762 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 HBS1LQ9Y450 684 aaKnown RBP12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 RPS6KL1Q9Y6S9 549 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 MICAL3Q7RTP6 2002 aa12.91□□□□□ -0.34
AC055717.2-201ENST00000561864 SCN5AQ14524 2016 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 SLC38A8A6NNN8 435 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 ANKRD65E5RJM6 399 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 KLF11O14901 512 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 UGT1A9O60656 530 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 CRHR1P34998 444 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 GP5P40197 560 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 SERPINB4P48594 390 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 CCL23P55773 120 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 CRADDP78560 199 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 CCDC15Q0P6D6 951 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 USP41Q3LFD5 358 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 ANKRD20A4Q4UJ75 823 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 C10orf120Q5SQS8 335 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 GRTP1Q5TC63 336 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 FBXO46Q6PJ61 603 aaPredicted RBP12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 RSPO2Q6UXX9 243 aaPredicted RBP12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 FAM47EQ6ZV65 393 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 RNF168Q8IYW5 571 aaPredicted RBP12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 CNTD1Q8N815 330 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 STKLD1Q8NE28 680 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 RAB3IL1Q8TBN0 382 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 ZNF398Q8TD17 642 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 PTCD2Q8WV60 388 aaKnown RBP12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 ZNF669Q96BR6 464 aaPredicted RBP12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 CPNE1Q99829 537 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 TBL1YQ9BQ87 522 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 MCOLN1Q9GZU1 580 aa12.9□□□□□ -0.34
AC055717.2-201ENST00000561864 RNF208Q9H0X6 261 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms