RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 GP5P40197 560 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 CBX3Q13185 183 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 OTUD1Q5VV17 481 aaPredicted RBP11.21□□□□□ -0.61
NEIL1-202ENST00000561643 SYPL2Q5VXT5 272 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 DUS1LQ6P1R4 473 aaKnown RBP11.21□□□□□ -0.61
NEIL1-202ENST00000561643 OSTM1Q86WC4 334 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 OR52K1Q8NGK4 314 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 DNAJB3Q8WWF6 145 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 ECSITQ9BQ95 431 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 TMEM216Q9P0N5 145 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 PLA2G4CQ9UP65 541 aa11.21□□□□□ -0.61
NEIL1-202ENST00000561643 PCNTO95613 3336 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 F8W8V4 182 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 DYNC1LI2O43237 492 aaPredicted RBP11.21□□□□□ -0.62
NEIL1-202ENST00000561643 BEST1O76090 585 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 CMC1Q7Z7K0 106 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.62
NEIL1-202ENST00000561643 RSPH3Q86UC2 560 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 DNAAF3Q8N9W5 541 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 ADAM32Q8TC27 787 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 ZNF669Q96BR6 464 aaPredicted RBP11.21□□□□□ -0.62
NEIL1-202ENST00000561643 NPY6RQ99463 290 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 HNRNPABQ99729 332 aaKnown RBP11.21□□□□□ -0.62
NEIL1-202ENST00000561643 ABHD16BQ9H3Z7 469 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 EBF3Q9H4W6 596 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 DDX18Q9NVP1 670 aaKnown RBP11.21□□□□□ -0.62
NEIL1-202ENST00000561643 PNPOQ9NVS9 261 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 SOX13Q9UN79 622 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 MAGED2Q9UNF1 606 aaPredicted RBP11.21□□□□□ -0.62
NEIL1-202ENST00000561643 SORCS3Q9UPU3 1222 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 GMEB1Q9Y692 573 aa11.21□□□□□ -0.62
NEIL1-202ENST00000561643 NRCAMQ92823 1304 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 ARHGAP42A6NI28 874 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 PROCP04070 461 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 RALBP11234 206 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 AOC1P19801 751 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 MX2P20592 715 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 GRK2P25098 689 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 GALK1P51570 392 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 GTF2A2P52657 109 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 LILRA4P59901 499 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 HPCAP84074 193 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 SPANXN3Q5MJ09 141 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 POU5F2Q8N7G0 328 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 SLC7A14Q8TBB6 771 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 WNT8BQ93098 351 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 MAML3Q96JK9 1138 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 PANX3Q96QZ0 392 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 CPNE1Q99829 537 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 PIGVQ9NUD9 493 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 DDX43Q9NXZ2 648 aaKnown RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 IGSF9Q9P2J2 1179 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 COPG2Q9UBF2 871 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 KLHL2O95198 593 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 CCDC166P0CW27 439 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 HOXD8P13378 290 aaPredicted RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 TKTL1P51854 596 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 CDC16Q13042 620 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 ITGA9Q13797 1035 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 PAFAH1B3Q15102 231 aaKnown RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 PCBP1Q15365 356 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 SH2D4BQ5SQS7 431 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 HFE2Q6ZVN8 426 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 PDZD4Q76G19 769 aaPredicted RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 RNF168Q8IYW5 571 aaPredicted RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 SLC25A41Q8N5S1 370 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 TMEM40Q8WWA1 233 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 TINF2Q9BSI4 451 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 STN1Q9H668 368 aaKnown RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 SNX15Q9NRS6 342 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 ZNF358Q9NW07 568 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 SF3B1O75533 1304 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 SMIM35A0A1B0GVV1 85 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 CCDC160A6NGH7 325 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 LSM1O15116 133 aaKnown RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 ADCY6O43306 1168 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 NDUFB5O43674 189 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 PGM3O95394 542 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 F7P08709 466 aaPredicted RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 ANPEPP15144 967 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 PTPN1P18031 435 aaKnown RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 ERCC2P18074 760 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 AXLP30530 894 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 MAP3K7CLP57077 242 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 TPI1P60174 286 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 ACTR3P61158 418 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 AP2B1P63010 937 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 SLC25A3Q00325 362 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 PLOD1Q02809 727 aaPredicted RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 DPYSQ14117 519 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 HIC1Q14526 733 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 SNX17Q15036 470 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 INSCQ1MX18 579 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 GRTP1Q5TC63 336 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 GPR142Q7Z601 462 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 DCLK2Q8N568 766 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 FCRL3Q96P31 734 aaPredicted RBP11.2□□□□□ -0.62
NEIL1-202ENST00000561643 LRRC40Q9H9A6 602 aa11.2□□□□□ -0.62
NEIL1-202ENST00000561643 BFARQ9NZS9 450 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms