RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CCDC42Q96M95 316 aa20.44■□□□□ 0.86
TSPAN3-210ENST00000561277 PACSIN1Q9BY11 444 aa20.44■□□□□ 0.86
TSPAN3-210ENST00000561277 ZNF212Q9UDV6 495 aa20.44■□□□□ 0.86
TSPAN3-210ENST00000561277 MBD1Q9UIS9 605 aaPredicted RBP20.44■□□□□ 0.86
TSPAN3-210ENST00000561277 SLC25A13Q9UJS0 675 aa20.44■□□□□ 0.86
TSPAN3-210ENST00000561277 ANAPC7Q9UJX3 599 aa20.44■□□□□ 0.86
TSPAN3-210ENST00000561277 EP300Q09472 2414 aaPredicted RBP20.44■□□□□ 0.86
TSPAN3-210ENST00000561277 FAM186AA6NE01 2351 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 SDK1Q7Z5N4 2213 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 SNAP91O60641 907 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 SIN3BO75182 1162 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 LRCH4O75427 683 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 RHOBTB1O94844 696 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 CYP1A2P05177 515 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 RETP07949 1114 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 ACADMP11310 421 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 EPHB2P29323 1055 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 KDM1BQ8NB78 822 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 PEBP4Q96S96 227 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 PSMB7Q99436 277 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 SPON2Q9BUD6 331 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 C2orf49Q9BVC5 232 aaPredicted RBP20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 NHEJ1Q9H9Q4 299 aaPredicted RBP20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 SPTLC3Q9NUV7 552 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 NDFIP2Q9NV92 336 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 DNAI1Q9UI46 699 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 AP4E1Q9UPM8 1137 aa20.43■□□□□ 0.86
TSPAN3-210ENST00000561277 IGHV1OR15-9A0A0B4J2B8 117 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 PRPSAP2O60256 369 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 RHOQP17081 205 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 MIPP30301 263 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 L1CAMP32004 1257 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 KRT83P78385 493 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 PMS2CLQ68D20 193 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 CTNNBL1Q8WYA6 563 aaPredicted RBP20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 MRFAP1L1Q96HT8 127 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 EPAS1Q99814 870 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 SNRNP25Q9BV90 132 aaKnown RBP20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 DHX35Q9H5Z1 703 aaKnown RBP20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 VPS51Q9UID3 782 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 EDDM13A0A1B0GTR0 161 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 ILVBLA1L0T0 632 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 RPL6Q02878 288 aaKnown RBP20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 GNA12Q03113 381 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 SPEM2Q0P670 501 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 ACCSLQ4AC99 568 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 ARMCX6Q7L4S7 300 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 NLRP14Q86W24 1093 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 TMEFF1Q8IYR6 380 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 TC2NQ8N9U0 490 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 DCAF4L2Q8NA75 395 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 TMEM248Q9NWD8 314 aa20.42■□□□□ 0.86
TSPAN3-210ENST00000561277 ABCA7Q8IZY2 2146 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 PLXND1Q9Y4D7 1925 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 CBX4O00257 560 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 VAV1P15498 845 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 GLDCP23378 1020 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 MAPKAPK2P49137 400 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 DHPSP49366 369 aaPredicted RBP20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 CCDC6Q16204 474 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 CA9Q16790 459 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 ERMARDQ5T6L9 678 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 C9orf64Q5T6V5 341 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 LINGO4Q6UY18 593 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 LPCAT2Q7L5N7 544 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 KIAA2013Q8IYS2 634 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 DEFB119Q8N690 84 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 ZNF564Q8TBZ8 553 aaPredicted RBP20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 ARRDC1-AS1Q9H2J1 176 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 FBRSQ9HAH7 460 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 ATP13A1Q9HD20 1204 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 USP36Q9P275 1121 aaKnown RBP20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 CTTNBP2NLQ9P2B4 639 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 USP18Q9UMW8 372 aa20.41■□□□□ 0.86
TSPAN3-210ENST00000561277 GVINP1Q7Z2Y8 2422 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 PTPRZ1P23471 2315 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 THADAQ6YHU6 1953 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 EPN2O95208 641 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 DNTTP04053 509 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 H2AFZP0C0S5 128 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 TPMTP51580 245 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 TPI1P60174 286 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 RPS14P62263 151 aaKnown RBP20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 CREB5Q02930 508 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 PIGHQ14442 188 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 ZNF776Q68DI1 518 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 IL31Q6EBC2 164 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 SLC36A4Q6YBV0 504 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 ZNF783Q6ZMS7 281 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 CYP4V2Q6ZWL3 525 aaPredicted RBP20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 H2AFVQ71UI9 128 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 ATP11CQ8NB49 1132 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 PTPRN2Q92932 1015 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 LOXL4Q96JB6 756 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 ITM2CQ9NQX7 267 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 IP6K2Q9UHH9 426 aa20.4■□□□□ 0.86
TSPAN3-210ENST00000561277 TARSL2A2RTX5 802 aaKnown RBP20.39■□□□□ 0.85
TSPAN3-210ENST00000561277 BNIP3LO60238 219 aa20.39■□□□□ 0.85
TSPAN3-210ENST00000561277 RNASEH1O60930 286 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms