RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 HPCAL4Q9UM19 191 aa9.27□□□□□ -0.93
SNRPA1-214ENST00000560987 SMG5Q9UPR3 1016 aaKnown RBP9.27□□□□□ -0.93
SNRPA1-214ENST00000560987 USP34Q70CQ2 3546 aa9.27□□□□□ -0.93
SNRPA1-214ENST00000560987 A0A0D9SEW6 157 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 TMEM110-MUSTN1A8MSY1 372 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 TTC34A8MYJ7 566 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 GOLGA6L6A8MZA4 724 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 CBX4O00257 560 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 ZNF217O75362 1048 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 LRIG2O94898 1065 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 DNTTP04053 509 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 CYP1A2P05177 515 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 NDUFV2P19404 249 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 MIPP30301 263 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 L1CAMP32004 1257 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 DHPSP49366 369 aaPredicted RBP9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 STK19P49842 368 aaPredicted RBP9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 DNA2P51530 1060 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 ACAP1Q15027 740 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 SPA17Q15506 151 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 HADHQ16836 314 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 PTPRNQ16849 979 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 PPP6R3Q5H9R7 873 aaPredicted RBP9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 RNF43Q68DV7 783 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 CXorf57Q6NSI4 855 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 LPCAT2Q7L5N7 544 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 FAM124AQ86V42 546 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 C11orf74Q86VG3 221 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 RASSF3Q86WH2 238 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 CACUL1Q86Y37 369 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 ZNF683Q8IZ20 524 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 FAM160A2Q8N612 972 aaPredicted RBP9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 DEFB119Q8N690 84 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 FRMD1Q8N878 549 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 ATP11CQ8NB49 1132 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 SUMF1Q8NBK3 374 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 SPC24Q8NBT2 197 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 OR7D4Q8NG98 312 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 OR52K2Q8NGK3 314 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 HSPH1Q92598 858 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 NTAN1Q96AB6 310 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 ARHGEF26Q96DR7 871 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 MRGPRX1Q96LB2 322 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 EPAS1Q99814 870 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 EPC1Q9H2F5 836 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 CATSPERBQ9H7T0 1116 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 ATP13A1Q9HD20 1204 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 PRSS16Q9NQE7 514 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 USP18Q9UMW8 372 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 CYP8B1Q9UNU6 501 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 NCKAP1Q9Y2A7 1128 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 TBC1D30Q9Y2I9 924 aa9.26□□□□□ -0.93
SNRPA1-214ENST00000560987 IGLV3-10A0A075B6K4 115 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 EDDM13A0A1B0GTR0 161 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 ILVBLA1L0T0 632 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 TARSL2A2RTX5 802 aaKnown RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 EEF2KO00418 725 aaKnown RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 SIN3BO75182 1162 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 CHRM1P11229 460 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 RHOQP17081 205 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 CYLC1P35663 651 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 MAGEA1P43355 309 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 NOP2P46087 812 aaKnown RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 TPI1P60174 286 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 RPL6Q02878 288 aaKnown RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 GNA12Q03113 381 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 CAMK2GQ13555 558 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 ENPP2Q13822 863 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 PUM1Q14671 1186 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 MESDQ14696 234 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 POLD3Q15054 466 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 DLG2Q15700 870 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 BOLA3Q53S33 107 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 DAB2IPQ5VWQ8 1189 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 LAIR1Q6GTX8 287 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 SLC36A4Q6YBV0 504 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 TMEFF1Q8IYR6 380 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 DCLK2Q8N568 766 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 TC2NQ8N9U0 490 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 OR2T3Q8NH03 318 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 SLC35G2Q8TBE7 412 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 ZNF564Q8TBZ8 553 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 FNIP1Q8TF40 1166 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 MRGPRX3Q96LB0 322 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 C2orf49Q9BVC5 232 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 PACSIN1Q9BY11 444 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 MKRN2Q9H000 416 aaKnown RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 ARRDC1-AS1Q9H2J1 176 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 TMEM245Q9H330 911 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 RETREG1Q9H6L5 497 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 TMEM248Q9NWD8 314 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 DONSONQ9NYP3 566 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 PTPRZ1P23471 2315 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-214ENST00000560987 PRR5-ARHGAP8B1AHC4 643 aa9.24□□□□□ -0.93
SNRPA1-214ENST00000560987 BUB1O43683 1085 aa9.24□□□□□ -0.93
SNRPA1-214ENST00000560987 SNAP91O60641 907 aa9.24□□□□□ -0.93
SNRPA1-214ENST00000560987 RAMP2O60895 175 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms